Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
EXTL3O43909 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
EXTL3O43909 ESRRAP1-201ENST00000400596 1257 ntBASIC21.67■■□□□ 1.06
EXTL3O43909 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
EXTL3O43909 RPS2P52-201ENST00000469610 820 ntBASIC21.67■■□□□ 1.06
EXTL3O43909 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
EXTL3O43909 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.67■■□□□ 1.06
EXTL3O43909 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.67■■□□□ 1.06
EXTL3O43909 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
EXTL3O43909 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
EXTL3O43909 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
EXTL3O43909 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
EXTL3O43909 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
EXTL3O43909 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
EXTL3O43909 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.66■■□□□ 1.06
EXTL3O43909 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
EXTL3O43909 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
EXTL3O43909 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
EXTL3O43909 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
EXTL3O43909 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
EXTL3O43909 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
EXTL3O43909 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EXTL3O43909 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.66■■□□□ 1.06
EXTL3O43909 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EXTL3O43909 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
EXTL3O43909 POU5F1P3-201ENST00000428824 1078 ntBASIC21.66■■□□□ 1.06
EXTL3O43909 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.66■■□□□ 1.06
EXTL3O43909 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.66■■□□□ 1.06
EXTL3O43909 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.66■■□□□ 1.06
EXTL3O43909 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.66■■□□□ 1.06
EXTL3O43909 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.66■■□□□ 1.06
EXTL3O43909 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
EXTL3O43909 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
EXTL3O43909 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.66■■□□□ 1.06
EXTL3O43909 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
EXTL3O43909 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
EXTL3O43909 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
EXTL3O43909 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
EXTL3O43909 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
EXTL3O43909 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
EXTL3O43909 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
EXTL3O43909 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
EXTL3O43909 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EXTL3O43909 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.65■■□□□ 1.06
EXTL3O43909 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.65■■□□□ 1.06
EXTL3O43909 POM121L13P-201ENST00000422362 380 ntBASIC21.65■■□□□ 1.06
EXTL3O43909 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
EXTL3O43909 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
EXTL3O43909 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
EXTL3O43909 AL691432.2-201ENST00000607222 2038 ntBASIC21.65■■□□□ 1.06
EXTL3O43909 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
EXTL3O43909 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EXTL3O43909 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.65■■□□□ 1.06
EXTL3O43909 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
EXTL3O43909 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EXTL3O43909 TCF3P1-201ENST00000423021 1937 ntBASIC21.65■■□□□ 1.06
EXTL3O43909 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
EXTL3O43909 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.64■■□□□ 1.06
EXTL3O43909 AC124283.5-201ENST00000624661 1809 ntBASIC21.64■■□□□ 1.06
EXTL3O43909 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.64■■□□□ 1.06
EXTL3O43909 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
EXTL3O43909 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
EXTL3O43909 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
EXTL3O43909 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.64■■□□□ 1.05
EXTL3O43909 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.64■■□□□ 1.05
EXTL3O43909 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.64■■□□□ 1.05
EXTL3O43909 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
EXTL3O43909 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
EXTL3O43909 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
EXTL3O43909 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
EXTL3O43909 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
EXTL3O43909 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
EXTL3O43909 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.64■■□□□ 1.05
EXTL3O43909 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
EXTL3O43909 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
EXTL3O43909 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
EXTL3O43909 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.64■■□□□ 1.05
EXTL3O43909 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.64■■□□□ 1.05
EXTL3O43909 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.64■■□□□ 1.05
EXTL3O43909 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
EXTL3O43909 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
EXTL3O43909 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
EXTL3O43909 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
EXTL3O43909 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.63■■□□□ 1.05
EXTL3O43909 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
EXTL3O43909 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
EXTL3O43909 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.63■■□□□ 1.05
EXTL3O43909 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
EXTL3O43909 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.63■■□□□ 1.05
EXTL3O43909 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
EXTL3O43909 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.63■■□□□ 1.05
EXTL3O43909 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.63■■□□□ 1.05
EXTL3O43909 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
EXTL3O43909 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
EXTL3O43909 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
EXTL3O43909 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
EXTL3O43909 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
EXTL3O43909 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.62■■□□□ 1.05
EXTL3O43909 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EXTL3O43909 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms