Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
PRICKLE3O43900 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE3O43900 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.18■□□□□ 0.66
PRICKLE3O43900 KRT17P3-201ENST00000420566 1262 ntBASIC19.18■□□□□ 0.66
PRICKLE3O43900 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE3O43900 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE3O43900 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE3O43900 AC069544.1-201ENST00000609399 999 ntBASIC19.18■□□□□ 0.66
PRICKLE3O43900 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE3O43900 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.18■□□□□ 0.66
PRICKLE3O43900 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE3O43900 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE3O43900 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE3O43900 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE3O43900 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.18■□□□□ 0.66
PRICKLE3O43900 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.18■□□□□ 0.66
PRICKLE3O43900 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE3O43900 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.18■□□□□ 0.66
PRICKLE3O43900 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE3O43900 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.18■□□□□ 0.66
PRICKLE3O43900 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE3O43900 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRICKLE3O43900 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRICKLE3O43900 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRICKLE3O43900 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PRICKLE3O43900 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.17■□□□□ 0.66
PRICKLE3O43900 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRICKLE3O43900 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.17■□□□□ 0.66
PRICKLE3O43900 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PRICKLE3O43900 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRICKLE3O43900 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRICKLE3O43900 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRICKLE3O43900 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRICKLE3O43900 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.17■□□□□ 0.66
PRICKLE3O43900 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.17■□□□□ 0.66
PRICKLE3O43900 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRICKLE3O43900 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRICKLE3O43900 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRICKLE3O43900 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRICKLE3O43900 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRICKLE3O43900 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRICKLE3O43900 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRICKLE3O43900 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
PRICKLE3O43900 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
PRICKLE3O43900 AL391422.3-201ENST00000603791 2761 ntBASIC19.16■□□□□ 0.66
PRICKLE3O43900 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.16■□□□□ 0.66
PRICKLE3O43900 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE3O43900 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE3O43900 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE3O43900 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE3O43900 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.16■□□□□ 0.66
PRICKLE3O43900 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE3O43900 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE3O43900 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.16■□□□□ 0.66
PRICKLE3O43900 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE3O43900 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.16■□□□□ 0.66
PRICKLE3O43900 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
PRICKLE3O43900 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
PRICKLE3O43900 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.16■□□□□ 0.66
PRICKLE3O43900 AL121829.2-201ENST00000620908 328 ntBASIC19.16■□□□□ 0.66
PRICKLE3O43900 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PRICKLE3O43900 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE3O43900 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE3O43900 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PRICKLE3O43900 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE3O43900 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
PRICKLE3O43900 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE3O43900 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE3O43900 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRICKLE3O43900 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRICKLE3O43900 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRICKLE3O43900 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.15■□□□□ 0.66
PRICKLE3O43900 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.15■□□□□ 0.66
PRICKLE3O43900 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRICKLE3O43900 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRICKLE3O43900 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRICKLE3O43900 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PRICKLE3O43900 PRORSD1P-201ENST00000295112 541 ntBASIC19.15■□□□□ 0.66
PRICKLE3O43900 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.15■□□□□ 0.66
PRICKLE3O43900 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.15■□□□□ 0.66
PRICKLE3O43900 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.15■□□□□ 0.66
PRICKLE3O43900 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.15■□□□□ 0.66
PRICKLE3O43900 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PRICKLE3O43900 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PRICKLE3O43900 MTDHP1-201ENST00000605323 784 ntBASIC19.15■□□□□ 0.66
PRICKLE3O43900 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRICKLE3O43900 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRICKLE3O43900 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PRICKLE3O43900 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRICKLE3O43900 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PRICKLE3O43900 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
PRICKLE3O43900 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PRICKLE3O43900 AL691432.2-201ENST00000607222 2038 ntBASIC19.14■□□□□ 0.65
PRICKLE3O43900 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PRICKLE3O43900 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRICKLE3O43900 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRICKLE3O43900 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRICKLE3O43900 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRICKLE3O43900 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRICKLE3O43900 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms