Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.16■□□□□ 0.66
DUX1O43812 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.16■□□□□ 0.66
DUX1O43812 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DUX1O43812 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.16■□□□□ 0.66
DUX1O43812 REXO1L12P-201ENST00000622156 912 ntBASIC19.16■□□□□ 0.66
DUX1O43812 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DUX1O43812 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
DUX1O43812 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DUX1O43812 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
DUX1O43812 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DUX1O43812 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
DUX1O43812 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
DUX1O43812 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DUX1O43812 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
DUX1O43812 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
DUX1O43812 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.15■□□□□ 0.66
DUX1O43812 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.15■□□□□ 0.66
DUX1O43812 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DUX1O43812 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DUX1O43812 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.15■□□□□ 0.66
DUX1O43812 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.15■□□□□ 0.66
DUX1O43812 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.15■□□□□ 0.66
DUX1O43812 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
DUX1O43812 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.15■□□□□ 0.66
DUX1O43812 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
DUX1O43812 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
DUX1O43812 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
DUX1O43812 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DUX1O43812 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DUX1O43812 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
DUX1O43812 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DUX1O43812 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.15■□□□□ 0.66
DUX1O43812 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.15■□□□□ 0.66
DUX1O43812 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DUX1O43812 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DUX1O43812 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.14■□□□□ 0.66
DUX1O43812 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
DUX1O43812 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
DUX1O43812 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
DUX1O43812 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.14■□□□□ 0.65
DUX1O43812 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
DUX1O43812 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DUX1O43812 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.14■□□□□ 0.65
DUX1O43812 AP002982.1-201ENST00000492365 877 ntBASIC19.14■□□□□ 0.65
DUX1O43812 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DUX1O43812 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.14■□□□□ 0.65
DUX1O43812 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.14■□□□□ 0.65
DUX1O43812 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.14■□□□□ 0.65
DUX1O43812 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
DUX1O43812 AC026471.5-201ENST00000615068 467 ntBASIC19.14■□□□□ 0.65
DUX1O43812 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
DUX1O43812 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DUX1O43812 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DUX1O43812 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.14■□□□□ 0.65
DUX1O43812 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
DUX1O43812 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DUX1O43812 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DUX1O43812 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DUX1O43812 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DUX1O43812 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DUX1O43812 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DUX1O43812 AL355355.2-201ENST00000442321 338 ntBASIC19.13■□□□□ 0.65
DUX1O43812 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
DUX1O43812 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.13■□□□□ 0.65
DUX1O43812 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.13■□□□□ 0.65
DUX1O43812 CD177P1-201ENST00000606252 935 ntBASIC19.13■□□□□ 0.65
DUX1O43812 AC073195.1-201ENST00000607241 877 ntBASIC19.13■□□□□ 0.65
DUX1O43812 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
DUX1O43812 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DUX1O43812 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DUX1O43812 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.13■□□□□ 0.65
DUX1O43812 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.13■□□□□ 0.65
DUX1O43812 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DUX1O43812 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DUX1O43812 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DUX1O43812 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DUX1O43812 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
DUX1O43812 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DUX1O43812 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.12■□□□□ 0.65
DUX1O43812 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DUX1O43812 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
DUX1O43812 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
DUX1O43812 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DUX1O43812 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DUX1O43812 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.12■□□□□ 0.65
DUX1O43812 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.12■□□□□ 0.65
DUX1O43812 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.12■□□□□ 0.65
DUX1O43812 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.12■□□□□ 0.65
DUX1O43812 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.12■□□□□ 0.65
DUX1O43812 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.12■□□□□ 0.65
DUX1O43812 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.12■□□□□ 0.65
DUX1O43812 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.12■□□□□ 0.65
DUX1O43812 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.12■□□□□ 0.65
DUX1O43812 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.12■□□□□ 0.65
DUX1O43812 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
DUX1O43812 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
DUX1O43812 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
DUX1O43812 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.12■□□□□ 0.65
DUX1O43812 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
DUX1O43812 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms