Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.44■□□□□ 0.7
E2F3O00716 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
E2F3O00716 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.44■□□□□ 0.7
E2F3O00716 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.44■□□□□ 0.7
E2F3O00716 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
E2F3O00716 AC010980.2-201ENST00000587099 1412 ntBASIC19.44■□□□□ 0.7
E2F3O00716 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
E2F3O00716 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
E2F3O00716 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.44■□□□□ 0.7
E2F3O00716 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
E2F3O00716 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
E2F3O00716 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
E2F3O00716 MIR4651-201ENST00000582622 73 ntBASIC19.44■□□□□ 0.7
E2F3O00716 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.44■□□□□ 0.7
E2F3O00716 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.44■□□□□ 0.7
E2F3O00716 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
E2F3O00716 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
E2F3O00716 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
E2F3O00716 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.43■□□□□ 0.7
E2F3O00716 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
E2F3O00716 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
E2F3O00716 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
E2F3O00716 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
E2F3O00716 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.43■□□□□ 0.7
E2F3O00716 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
E2F3O00716 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.43■□□□□ 0.7
E2F3O00716 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
E2F3O00716 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
E2F3O00716 SLC29A4P1-201ENST00000398760 971 ntBASIC19.43■□□□□ 0.7
E2F3O00716 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.43■□□□□ 0.7
E2F3O00716 AC069152.1-201ENST00000438030 544 ntBASIC19.43■□□□□ 0.7
E2F3O00716 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.43■□□□□ 0.7
E2F3O00716 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
E2F3O00716 AL031963.3-201ENST00000606441 850 ntBASIC19.43■□□□□ 0.7
E2F3O00716 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.43■□□□□ 0.7
E2F3O00716 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
E2F3O00716 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
E2F3O00716 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
E2F3O00716 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
E2F3O00716 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
E2F3O00716 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.43■□□□□ 0.7
E2F3O00716 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
E2F3O00716 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
E2F3O00716 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.43■□□□□ 0.7
E2F3O00716 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
E2F3O00716 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
E2F3O00716 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.42■□□□□ 0.7
E2F3O00716 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
E2F3O00716 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
E2F3O00716 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.42■□□□□ 0.7
E2F3O00716 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
E2F3O00716 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
E2F3O00716 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.42■□□□□ 0.7
E2F3O00716 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
E2F3O00716 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
E2F3O00716 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
E2F3O00716 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.42■□□□□ 0.7
E2F3O00716 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
E2F3O00716 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
E2F3O00716 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
E2F3O00716 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
E2F3O00716 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
E2F3O00716 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
E2F3O00716 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
E2F3O00716 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
E2F3O00716 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
E2F3O00716 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
E2F3O00716 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
E2F3O00716 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
E2F3O00716 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
E2F3O00716 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.41■□□□□ 0.7
E2F3O00716 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
E2F3O00716 AL512625.2-201ENST00000417533 625 ntBASIC19.41■□□□□ 0.7
E2F3O00716 AC093787.1-201ENST00000450396 207 ntBASIC19.41■□□□□ 0.7
E2F3O00716 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.41■□□□□ 0.7
E2F3O00716 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.41■□□□□ 0.7
E2F3O00716 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.41■□□□□ 0.7
E2F3O00716 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.41■□□□□ 0.7
E2F3O00716 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.41■□□□□ 0.7
E2F3O00716 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
E2F3O00716 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
E2F3O00716 KRT8P20-201ENST00000423953 1409 ntBASIC19.41■□□□□ 0.7
E2F3O00716 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.41■□□□□ 0.7
E2F3O00716 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.4■□□□□ 0.7
E2F3O00716 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.4■□□□□ 0.7
E2F3O00716 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.4■□□□□ 0.7
E2F3O00716 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.4■□□□□ 0.7
E2F3O00716 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
E2F3O00716 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.4■□□□□ 0.7
E2F3O00716 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
E2F3O00716 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
E2F3O00716 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
E2F3O00716 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
E2F3O00716 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.4■□□□□ 0.7
E2F3O00716 AC098934.4-201ENST00000564127 592 ntBASIC19.4■□□□□ 0.7
E2F3O00716 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.4■□□□□ 0.7
E2F3O00716 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
E2F3O00716 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
E2F3O00716 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.4■□□□□ 0.7
E2F3O00716 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms