Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLC28A1O00337 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC28A1O00337 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC28A1O00337 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC28A1O00337 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SLC28A1O00337 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SLC28A1O00337 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC28A1O00337 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SLC28A1O00337 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC28A1O00337 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.19■□□□□ 0.66
SLC28A1O00337 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC28A1O00337 AC008694.1-202ENST00000636953 945 ntBASIC19.19■□□□□ 0.66
SLC28A1O00337 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC28A1O00337 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC28A1O00337 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC28A1O00337 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC28A1O00337 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC28A1O00337 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC28A1O00337 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC28A1O00337 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC28A1O00337 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC28A1O00337 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC28A1O00337 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.18■□□□□ 0.66
SLC28A1O00337 AC006015.1-201ENST00000429970 570 ntBASIC19.18■□□□□ 0.66
SLC28A1O00337 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC28A1O00337 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC28A1O00337 CYP2T3P-201ENST00000601990 817 ntBASIC19.18■□□□□ 0.66
SLC28A1O00337 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC28A1O00337 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC28A1O00337 TREX1-205ENST00000625293 1783 ntBASIC19.18■□□□□ 0.66
SLC28A1O00337 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC28A1O00337 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC28A1O00337 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC28A1O00337 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC28A1O00337 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC28A1O00337 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SLC28A1O00337 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC28A1O00337 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC28A1O00337 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SLC28A1O00337 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC28A1O00337 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC28A1O00337 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC28A1O00337 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC28A1O00337 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.17■□□□□ 0.66
SLC28A1O00337 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC28A1O00337 AC231657.2-201ENST00000624556 255 ntBASIC19.17■□□□□ 0.66
SLC28A1O00337 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC28A1O00337 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC28A1O00337 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC28A1O00337 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC28A1O00337 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC28A1O00337 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SLC28A1O00337 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC28A1O00337 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SLC28A1O00337 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC28A1O00337 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC28A1O00337 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC28A1O00337 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC28A1O00337 HLA-G-202ENST00000376815 851 ntBASIC19.16■□□□□ 0.66
SLC28A1O00337 HLA-G-203ENST00000376818 1127 ntBASIC19.16■□□□□ 0.66
SLC28A1O00337 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SLC28A1O00337 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.16■□□□□ 0.66
SLC28A1O00337 BID-214ENST00000617586 542 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC28A1O00337 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC28A1O00337 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC28A1O00337 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SLC28A1O00337 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC28A1O00337 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SLC28A1O00337 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SLC28A1O00337 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SLC28A1O00337 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC28A1O00337 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC28A1O00337 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC28A1O00337 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC28A1O00337 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC28A1O00337 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC28A1O00337 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC28A1O00337 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SLC28A1O00337 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SLC28A1O00337 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC28A1O00337 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC28A1O00337 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC28A1O00337 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC28A1O00337 CYP2T1P-201ENST00000432607 1285 ntBASIC19.15■□□□□ 0.66
SLC28A1O00337 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC28A1O00337 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.15■□□□□ 0.66
SLC28A1O00337 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC28A1O00337 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC28A1O00337 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC28A1O00337 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
SLC28A1O00337 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC28A1O00337 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SLC28A1O00337 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SLC28A1O00337 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SLC28A1O00337 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC28A1O00337 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC28A1O00337 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SLC28A1O00337 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC28A1O00337 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC28A1O00337 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms