Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EIF3FO00303 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
EIF3FO00303 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.52■□□□□ 0.72
EIF3FO00303 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3FO00303 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3FO00303 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.52■□□□□ 0.72
EIF3FO00303 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
EIF3FO00303 AC112907.3-201ENST00000577781 2400 ntBASIC19.52■□□□□ 0.72
EIF3FO00303 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.52■□□□□ 0.72
EIF3FO00303 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.52■□□□□ 0.72
EIF3FO00303 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.52■□□□□ 0.72
EIF3FO00303 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.52■□□□□ 0.72
EIF3FO00303 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3FO00303 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.52■□□□□ 0.72
EIF3FO00303 AC142086.2-201ENST00000569753 217 ntBASIC19.52■□□□□ 0.72
EIF3FO00303 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.52■□□□□ 0.72
EIF3FO00303 AC005829.2-201ENST00000571422 1056 ntBASIC19.52■□□□□ 0.72
EIF3FO00303 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.52■□□□□ 0.72
EIF3FO00303 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3FO00303 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3FO00303 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3FO00303 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3FO00303 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
EIF3FO00303 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.52■□□□□ 0.71
EIF3FO00303 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
EIF3FO00303 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.71
EIF3FO00303 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3FO00303 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.51■□□□□ 0.71
EIF3FO00303 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.51■□□□□ 0.71
EIF3FO00303 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3FO00303 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3FO00303 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
EIF3FO00303 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3FO00303 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
EIF3FO00303 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.51■□□□□ 0.71
EIF3FO00303 AL390719.1-204ENST00000412397 1219 ntBASIC19.51■□□□□ 0.71
EIF3FO00303 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.51■□□□□ 0.71
EIF3FO00303 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.51■□□□□ 0.71
EIF3FO00303 AL138781.1-201ENST00000566567 1274 ntBASIC19.51■□□□□ 0.71
EIF3FO00303 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.51■□□□□ 0.71
EIF3FO00303 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.51■□□□□ 0.71
EIF3FO00303 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3FO00303 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3FO00303 HLA-B-256ENST00000639848 1089 ntBASIC19.51■□□□□ 0.71
EIF3FO00303 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.51■□□□□ 0.71
EIF3FO00303 AC133041.1-202ENST00000642053 222 ntBASIC19.51■□□□□ 0.71
EIF3FO00303 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3FO00303 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3FO00303 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3FO00303 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3FO00303 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3FO00303 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3FO00303 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3FO00303 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
EIF3FO00303 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3FO00303 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3FO00303 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EIF3FO00303 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
EIF3FO00303 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.5■□□□□ 0.71
EIF3FO00303 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3FO00303 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.5■□□□□ 0.71
EIF3FO00303 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.5■□□□□ 0.71
EIF3FO00303 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3FO00303 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.5■□□□□ 0.71
EIF3FO00303 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
EIF3FO00303 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.5■□□□□ 0.71
EIF3FO00303 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.5■□□□□ 0.71
EIF3FO00303 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.5■□□□□ 0.71
EIF3FO00303 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3FO00303 AC104771.1-201ENST00000603335 964 ntBASIC19.5■□□□□ 0.71
EIF3FO00303 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3FO00303 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
EIF3FO00303 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3FO00303 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3FO00303 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.5■□□□□ 0.71
EIF3FO00303 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3FO00303 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3FO00303 PHGDH-210ENST00000641115 1638 ntBASIC19.5■□□□□ 0.71
EIF3FO00303 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3FO00303 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3FO00303 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EIF3FO00303 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
EIF3FO00303 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
EIF3FO00303 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.49■□□□□ 0.71
EIF3FO00303 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EIF3FO00303 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.49■□□□□ 0.71
EIF3FO00303 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
EIF3FO00303 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.49■□□□□ 0.71
EIF3FO00303 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.49■□□□□ 0.71
EIF3FO00303 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
EIF3FO00303 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EIF3FO00303 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EIF3FO00303 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
EIF3FO00303 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
EIF3FO00303 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.49■□□□□ 0.71
EIF3FO00303 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.49■□□□□ 0.71
EIF3FO00303 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.49■□□□□ 0.71
EIF3FO00303 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.49■□□□□ 0.71
EIF3FO00303 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.49■□□□□ 0.71
EIF3FO00303 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms