Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SPDYE4A6NLX3 AP000974.1-201ENST00000623909 2387 ntBASIC22.32■■□□□ 1.16
SPDYE4A6NLX3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.32■■□□□ 1.16
SPDYE4A6NLX3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
SPDYE4A6NLX3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SPDYE4A6NLX3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SPDYE4A6NLX3 AL512625.2-201ENST00000417533 625 ntBASIC22.32■■□□□ 1.16
SPDYE4A6NLX3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
SPDYE4A6NLX3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SPDYE4A6NLX3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.32■■□□□ 1.16
SPDYE4A6NLX3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SPDYE4A6NLX3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SPDYE4A6NLX3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SPDYE4A6NLX3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 SERPINH1P1-201ENST00000419794 1249 ntBASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
SPDYE4A6NLX3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SPDYE4A6NLX3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SPDYE4A6NLX3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SPDYE4A6NLX3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SPDYE4A6NLX3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SPDYE4A6NLX3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SPDYE4A6NLX3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.3■■□□□ 1.16
SPDYE4A6NLX3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.3■■□□□ 1.16
SPDYE4A6NLX3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.3■■□□□ 1.16
SPDYE4A6NLX3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.3■■□□□ 1.16
SPDYE4A6NLX3 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC22.3■■□□□ 1.16
SPDYE4A6NLX3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.3■■□□□ 1.16
SPDYE4A6NLX3 AC022726.2-201ENST00000634673 547 ntBASIC22.3■■□□□ 1.16
SPDYE4A6NLX3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SPDYE4A6NLX3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC22.3■■□□□ 1.16
SPDYE4A6NLX3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SPDYE4A6NLX3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SPDYE4A6NLX3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SPDYE4A6NLX3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SPDYE4A6NLX3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SPDYE4A6NLX3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.29■■□□□ 1.16
SPDYE4A6NLX3 AC116562.4-201ENST00000641316 2276 ntBASIC22.29■■□□□ 1.16
SPDYE4A6NLX3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
SPDYE4A6NLX3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SPDYE4A6NLX3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22.29■■□□□ 1.16
SPDYE4A6NLX3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
SPDYE4A6NLX3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SPDYE4A6NLX3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC22.29■■□□□ 1.16
SPDYE4A6NLX3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.29■■□□□ 1.16
SPDYE4A6NLX3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.29■■□□□ 1.16
SPDYE4A6NLX3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC22.29■■□□□ 1.16
SPDYE4A6NLX3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SPDYE4A6NLX3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SPDYE4A6NLX3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SPDYE4A6NLX3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SPDYE4A6NLX3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SPDYE4A6NLX3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC22.29■■□□□ 1.16
SPDYE4A6NLX3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 PRORSD1P-201ENST00000295112 541 ntBASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 HCG24-202ENST00000414398 717 ntTSL 3 BASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 AL591742.1-201ENST00000604433 565 ntBASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 AP006294.2-201ENST00000641667 209 ntBASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.28■■□□□ 1.16
SPDYE4A6NLX3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms