Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CAPN8A6NHC0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.21■□□□□ 0.83
CAPN8A6NHC0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN8A6NHC0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.21■□□□□ 0.83
CAPN8A6NHC0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN8A6NHC0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN8A6NHC0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN8A6NHC0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN8A6NHC0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.21■□□□□ 0.83
CAPN8A6NHC0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.2■□□□□ 0.82
CAPN8A6NHC0 PTBP1P-201ENST00000554374 1601 ntBASIC20.2■□□□□ 0.82
CAPN8A6NHC0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CAPN8A6NHC0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CAPN8A6NHC0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN8A6NHC0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.2■□□□□ 0.82
CAPN8A6NHC0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CAPN8A6NHC0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN8A6NHC0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN8A6NHC0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.2■□□□□ 0.82
CAPN8A6NHC0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN8A6NHC0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN8A6NHC0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.2■□□□□ 0.82
CAPN8A6NHC0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.2■□□□□ 0.82
CAPN8A6NHC0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.2■□□□□ 0.82
CAPN8A6NHC0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN8A6NHC0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.2■□□□□ 0.82
CAPN8A6NHC0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.2■□□□□ 0.82
CAPN8A6NHC0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN8A6NHC0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CAPN8A6NHC0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CAPN8A6NHC0 GABARAPL3-202ENST00000624044 1851 ntBASIC20.2■□□□□ 0.82
CAPN8A6NHC0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CAPN8A6NHC0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN8A6NHC0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPN8A6NHC0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN8A6NHC0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPN8A6NHC0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN8A6NHC0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPN8A6NHC0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPN8A6NHC0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.19■□□□□ 0.82
CAPN8A6NHC0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
CAPN8A6NHC0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPN8A6NHC0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPN8A6NHC0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN8A6NHC0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
CAPN8A6NHC0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CAPN8A6NHC0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN8A6NHC0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN8A6NHC0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CAPN8A6NHC0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CAPN8A6NHC0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPN8A6NHC0 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.18■□□□□ 0.82
CAPN8A6NHC0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.18■□□□□ 0.82
CAPN8A6NHC0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.18■□□□□ 0.82
CAPN8A6NHC0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN8A6NHC0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CAPN8A6NHC0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN8A6NHC0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN8A6NHC0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN8A6NHC0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CAPN8A6NHC0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.18■□□□□ 0.82
CAPN8A6NHC0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN8A6NHC0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN8A6NHC0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN8A6NHC0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.18■□□□□ 0.82
CAPN8A6NHC0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN8A6NHC0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CAPN8A6NHC0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CAPN8A6NHC0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.18■□□□□ 0.82
CAPN8A6NHC0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 AC092368.3-202ENST00000574180 1591 ntBASIC20.17■□□□□ 0.82
CAPN8A6NHC0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 RPS2P4-201ENST00000476944 856 ntBASIC20.17■□□□□ 0.82
CAPN8A6NHC0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 RNA5SP413-201ENST00000516373 109 ntBASIC20.17■□□□□ 0.82
CAPN8A6NHC0 AC023632.3-201ENST00000521633 145 ntBASIC20.17■□□□□ 0.82
CAPN8A6NHC0 PNMA6B-201ENST00000538162 1200 ntBASIC20.17■□□□□ 0.82
CAPN8A6NHC0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CAPN8A6NHC0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms