Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RCCD1A6NED2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RCCD1A6NED2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RCCD1A6NED2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RCCD1A6NED2 TERF1P5-201ENST00000477545 1207 ntBASIC21.21■□□□□ 0.99
RCCD1A6NED2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.21■□□□□ 0.99
RCCD1A6NED2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.21■□□□□ 0.99
RCCD1A6NED2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.21■□□□□ 0.99
RCCD1A6NED2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.21■□□□□ 0.99
RCCD1A6NED2 AL591742.1-201ENST00000604433 565 ntBASIC21.21■□□□□ 0.99
RCCD1A6NED2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.21■□□□□ 0.99
RCCD1A6NED2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RCCD1A6NED2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RCCD1A6NED2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RCCD1A6NED2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RCCD1A6NED2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RCCD1A6NED2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.21■□□□□ 0.99
RCCD1A6NED2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.21■□□□□ 0.99
RCCD1A6NED2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
RCCD1A6NED2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RCCD1A6NED2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RCCD1A6NED2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.21■□□□□ 0.99
RCCD1A6NED2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.2■□□□□ 0.98
RCCD1A6NED2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
RCCD1A6NED2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RCCD1A6NED2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.2■□□□□ 0.98
RCCD1A6NED2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.2■□□□□ 0.98
RCCD1A6NED2 PGM5P4-201ENST00000421970 445 ntBASIC21.2■□□□□ 0.98
RCCD1A6NED2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
RCCD1A6NED2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.2■□□□□ 0.98
RCCD1A6NED2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RCCD1A6NED2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.2■□□□□ 0.98
RCCD1A6NED2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RCCD1A6NED2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RCCD1A6NED2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RCCD1A6NED2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.2■□□□□ 0.98
RCCD1A6NED2 KRT8P17-201ENST00000453110 1448 ntBASIC21.2■□□□□ 0.98
RCCD1A6NED2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RCCD1A6NED2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RCCD1A6NED2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RCCD1A6NED2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.19■□□□□ 0.98
RCCD1A6NED2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RCCD1A6NED2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.19■□□□□ 0.98
RCCD1A6NED2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.19■□□□□ 0.98
RCCD1A6NED2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RCCD1A6NED2 ZNRF2P3-201ENST00000424200 374 ntBASIC21.19■□□□□ 0.98
RCCD1A6NED2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.19■□□□□ 0.98
RCCD1A6NED2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.19■□□□□ 0.98
RCCD1A6NED2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.19■□□□□ 0.98
RCCD1A6NED2 AC010536.3-201ENST00000620306 533 ntBASIC21.19■□□□□ 0.98
RCCD1A6NED2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RCCD1A6NED2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RCCD1A6NED2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RCCD1A6NED2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RCCD1A6NED2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RCCD1A6NED2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RCCD1A6NED2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RCCD1A6NED2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RCCD1A6NED2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RCCD1A6NED2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RCCD1A6NED2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RCCD1A6NED2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.18■□□□□ 0.98
RCCD1A6NED2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RCCD1A6NED2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RCCD1A6NED2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.18■□□□□ 0.98
RCCD1A6NED2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.18■□□□□ 0.98
RCCD1A6NED2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.18■□□□□ 0.98
RCCD1A6NED2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.18■□□□□ 0.98
RCCD1A6NED2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.18■□□□□ 0.98
RCCD1A6NED2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RCCD1A6NED2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RCCD1A6NED2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RCCD1A6NED2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.18■□□□□ 0.98
RCCD1A6NED2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RCCD1A6NED2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RCCD1A6NED2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
RCCD1A6NED2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
RCCD1A6NED2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RCCD1A6NED2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RCCD1A6NED2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RCCD1A6NED2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RCCD1A6NED2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RCCD1A6NED2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RCCD1A6NED2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RCCD1A6NED2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RCCD1A6NED2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RCCD1A6NED2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RCCD1A6NED2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RCCD1A6NED2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RCCD1A6NED2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RCCD1A6NED2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.17■□□□□ 0.98
RCCD1A6NED2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.17■□□□□ 0.98
RCCD1A6NED2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RCCD1A6NED2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.17■□□□□ 0.98
RCCD1A6NED2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RCCD1A6NED2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
RCCD1A6NED2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.17■□□□□ 0.98
RCCD1A6NED2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RCCD1A6NED2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RCCD1A6NED2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms