Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCDC163A0A0D9SF12 FAM87A-204ENST00000613235 858 ntBASIC19.81■□□□□ 0.76
CCDC163A0A0D9SF12 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC163A0A0D9SF12 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC163A0A0D9SF12 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC163A0A0D9SF12 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC163A0A0D9SF12 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC163A0A0D9SF12 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCDC163A0A0D9SF12 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CCDC163A0A0D9SF12 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC163A0A0D9SF12 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC163A0A0D9SF12 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC163A0A0D9SF12 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC163A0A0D9SF12 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC163A0A0D9SF12 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC163A0A0D9SF12 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC163A0A0D9SF12 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC163A0A0D9SF12 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC163A0A0D9SF12 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC163A0A0D9SF12 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC163A0A0D9SF12 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC163A0A0D9SF12 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC163A0A0D9SF12 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC163A0A0D9SF12 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC163A0A0D9SF12 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC163A0A0D9SF12 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC163A0A0D9SF12 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC163A0A0D9SF12 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC163A0A0D9SF12 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC163A0A0D9SF12 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC163A0A0D9SF12 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC163A0A0D9SF12 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC163A0A0D9SF12 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC163A0A0D9SF12 CRYGFP-201ENST00000418459 633 ntBASIC19.79■□□□□ 0.76
CCDC163A0A0D9SF12 UPK3BP1-201ENST00000428678 509 ntBASIC19.79■□□□□ 0.76
CCDC163A0A0D9SF12 YBX1P10-201ENST00000444752 975 ntBASIC19.79■□□□□ 0.76
CCDC163A0A0D9SF12 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC163A0A0D9SF12 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC163A0A0D9SF12 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC163A0A0D9SF12 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC163A0A0D9SF12 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC163A0A0D9SF12 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 AP000692.2-201ENST00000608391 879 ntBASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 AC130371.2-201ENST00000619443 611 ntBASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 MYC-208ENST00000641036 567 ntBASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC163A0A0D9SF12 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC163A0A0D9SF12 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC163A0A0D9SF12 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC163A0A0D9SF12 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC163A0A0D9SF12 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC163A0A0D9SF12 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
CCDC163A0A0D9SF12 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC163A0A0D9SF12 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
CCDC163A0A0D9SF12 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC163A0A0D9SF12 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CCDC163A0A0D9SF12 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC163A0A0D9SF12 AC091390.4-202ENST00000476426 537 ntBASIC19.77■□□□□ 0.76
CCDC163A0A0D9SF12 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC163A0A0D9SF12 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC163A0A0D9SF12 KRT18P16-201ENST00000510337 1294 ntBASIC19.77■□□□□ 0.76
CCDC163A0A0D9SF12 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC163A0A0D9SF12 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC163A0A0D9SF12 AL358472.4-201ENST00000633140 710 ntBASIC19.77■□□□□ 0.76
CCDC163A0A0D9SF12 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC163A0A0D9SF12 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC163A0A0D9SF12 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC163A0A0D9SF12 AC244015.2-201ENST00000616358 1861 ntBASIC19.77■□□□□ 0.76
CCDC163A0A0D9SF12 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC163A0A0D9SF12 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CCDC163A0A0D9SF12 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC163A0A0D9SF12 GUSBP5-202ENST00000510805 1989 ntBASIC19.76■□□□□ 0.75
CCDC163A0A0D9SF12 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC163A0A0D9SF12 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC163A0A0D9SF12 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC163A0A0D9SF12 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC163A0A0D9SF12 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC163A0A0D9SF12 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC163A0A0D9SF12 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC163A0A0D9SF12 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.76■□□□□ 0.75
CCDC163A0A0D9SF12 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC163A0A0D9SF12 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms