Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV4A0A0B4J268 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 TCF3P1-201ENST00000423021 1937 ntBASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 AC105020.6-201ENST00000621523 1217 ntBASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRAV4A0A0B4J268 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 KRT18P68-201ENST00000392293 1000 ntBASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 AC022517.1-201ENST00000592429 346 ntBASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 OR10C1-204ENST00000622521 1039 ntBASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV4A0A0B4J268 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14.33□□□□□ -0.11
TRAV4A0A0B4J268 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
TRAV4A0A0B4J268 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV4A0A0B4J268 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV4A0A0B4J268 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV4A0A0B4J268 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV4A0A0B4J268 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 CYP2T3P-201ENST00000601990 817 ntBASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 BX119927.1-201ENST00000636596 1552 ntBASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms