Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV13-2A0A0B4J235 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 PKD1P5-201ENST00000532415 10291 ntBASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 AC103724.3-201ENST00000564481 992 ntBASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 FER1L4-210ENST00000615531 5998 ntBASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV13-2A0A0B4J235 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 AC006455.2-201ENST00000429931 906 ntBASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAV13-2A0A0B4J235 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC13.15□□□□□ -0.31
TRAV13-2A0A0B4J235 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
TRAV13-2A0A0B4J235 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 PWWP2AP1-201ENST00000429776 2273 ntBASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV13-2A0A0B4J235 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms