Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 DUSP5P2-201ENST00000426873 1033 ntBASIC17.64■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.64■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.64■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.64■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.64■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.64■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 AC023632.3-201ENST00000521633 145 ntBASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 AC098934.4-201ENST00000564127 592 ntBASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.62■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.62■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.62■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.62■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 AC091874.3-201ENST00000512672 1195 ntBASIC17.62■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 AC090192.1-201ENST00000517740 490 ntBASIC17.62■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.62■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 AC092118.2-201ENST00000613495 667 ntBASIC17.62■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.62■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 KRT16P6-202ENST00000425692 1426 ntBASIC17.62■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.62■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.62■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.62■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 SLC29A4P1-201ENST00000398760 971 ntBASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 AL138781.1-201ENST00000566567 1274 ntBASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.61■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.6■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.6■□□□□ 0.41
IGKV1D-43A0A0B4J1Z2 HLA-G-202ENST00000376815 851 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms