Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
DDX49Q9Y6V7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
DDX49Q9Y6V7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.81■■■□□ 2.52
DDX49Q9Y6V7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.8■■■□□ 2.52
DDX49Q9Y6V7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
DDX49Q9Y6V7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
DDX49Q9Y6V7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
DDX49Q9Y6V7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
DDX49Q9Y6V7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.79■■■□□ 2.52
DDX49Q9Y6V7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.79■■■□□ 2.52
DDX49Q9Y6V7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC30.79■■■□□ 2.52
DDX49Q9Y6V7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
DDX49Q9Y6V7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
DDX49Q9Y6V7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
DDX49Q9Y6V7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
DDX49Q9Y6V7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
DDX49Q9Y6V7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.77■■■□□ 2.52
DDX49Q9Y6V7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.77■■■□□ 2.52
DDX49Q9Y6V7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.52
DDX49Q9Y6V7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.75■■■□□ 2.51
DDX49Q9Y6V7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
DDX49Q9Y6V7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
DDX49Q9Y6V7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.74■■■□□ 2.51
DDX49Q9Y6V7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
DDX49Q9Y6V7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
DDX49Q9Y6V7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.73■■■□□ 2.51
DDX49Q9Y6V7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.73■■■□□ 2.51
DDX49Q9Y6V7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
DDX49Q9Y6V7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC30.73■■■□□ 2.51
DDX49Q9Y6V7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
DDX49Q9Y6V7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
DDX49Q9Y6V7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
DDX49Q9Y6V7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.71■■■□□ 2.51
DDX49Q9Y6V7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.71■■■□□ 2.51
DDX49Q9Y6V7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
DDX49Q9Y6V7 AL135925.1-201ENST00000605920 1701 ntBASIC30.7■■■□□ 2.51
DDX49Q9Y6V7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
DDX49Q9Y6V7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
DDX49Q9Y6V7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
DDX49Q9Y6V7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.7■■■□□ 2.51
DDX49Q9Y6V7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.7■■■□□ 2.51
DDX49Q9Y6V7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.7■■■□□ 2.51
DDX49Q9Y6V7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC30.69■■■□□ 2.5
DDX49Q9Y6V7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
DDX49Q9Y6V7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.68■■■□□ 2.5
DDX49Q9Y6V7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
DDX49Q9Y6V7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.67■■■□□ 2.5
DDX49Q9Y6V7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
DDX49Q9Y6V7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
DDX49Q9Y6V7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.67■■■□□ 2.5
DDX49Q9Y6V7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
DDX49Q9Y6V7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
DDX49Q9Y6V7 ZNRF2P2-203ENST00000454624 420 ntBASIC30.66■■■□□ 2.5
DDX49Q9Y6V7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.66■■■□□ 2.5
DDX49Q9Y6V7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
DDX49Q9Y6V7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
DDX49Q9Y6V7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
DDX49Q9Y6V7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
DDX49Q9Y6V7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
DDX49Q9Y6V7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.63■■■□□ 2.49
DDX49Q9Y6V7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
DDX49Q9Y6V7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
DDX49Q9Y6V7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
DDX49Q9Y6V7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
DDX49Q9Y6V7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
DDX49Q9Y6V7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
DDX49Q9Y6V7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.61■■■□□ 2.49
DDX49Q9Y6V7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
DDX49Q9Y6V7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
DDX49Q9Y6V7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
DDX49Q9Y6V7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.6■■■□□ 2.49
DDX49Q9Y6V7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
DDX49Q9Y6V7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
DDX49Q9Y6V7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
DDX49Q9Y6V7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
DDX49Q9Y6V7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.58■■■□□ 2.49
DDX49Q9Y6V7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
DDX49Q9Y6V7 MIR6090-201ENST00000622481 60 ntBASIC30.57■■■□□ 2.48
DDX49Q9Y6V7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
DDX49Q9Y6V7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC30.55■■■□□ 2.48
DDX49Q9Y6V7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.55■■■□□ 2.48
DDX49Q9Y6V7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
DDX49Q9Y6V7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.54■■■□□ 2.48
DDX49Q9Y6V7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
DDX49Q9Y6V7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC30.54■■■□□ 2.48
DDX49Q9Y6V7 AC021231.2-201ENST00000594613 730 ntBASIC30.53■■■□□ 2.48
DDX49Q9Y6V7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
DDX49Q9Y6V7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.52■■■□□ 2.48
DDX49Q9Y6V7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
DDX49Q9Y6V7 HLA-V-202ENST00000446817 847 ntBASIC30.51■■■□□ 2.47
DDX49Q9Y6V7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.5■■■□□ 2.47
DDX49Q9Y6V7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
DDX49Q9Y6V7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
DDX49Q9Y6V7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
DDX49Q9Y6V7 DUX4L29-201ENST00000425409 679 ntBASIC30.49■■■□□ 2.47
DDX49Q9Y6V7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
DDX49Q9Y6V7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
DDX49Q9Y6V7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.48■■■□□ 2.47
DDX49Q9Y6V7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
DDX49Q9Y6V7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms