Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
DDX49Q9Y6V7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
DDX49Q9Y6V7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.81■■■□□ 2.52
DDX49Q9Y6V7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.8■■■□□ 2.52
DDX49Q9Y6V7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
DDX49Q9Y6V7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
DDX49Q9Y6V7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
DDX49Q9Y6V7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
DDX49Q9Y6V7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.79■■■□□ 2.52
DDX49Q9Y6V7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.79■■■□□ 2.52
DDX49Q9Y6V7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC30.79■■■□□ 2.52
DDX49Q9Y6V7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
DDX49Q9Y6V7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
DDX49Q9Y6V7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
DDX49Q9Y6V7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
DDX49Q9Y6V7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
DDX49Q9Y6V7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.77■■■□□ 2.52
DDX49Q9Y6V7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.77■■■□□ 2.52
DDX49Q9Y6V7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.52
DDX49Q9Y6V7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.75■■■□□ 2.51
DDX49Q9Y6V7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
DDX49Q9Y6V7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
DDX49Q9Y6V7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.74■■■□□ 2.51
DDX49Q9Y6V7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
DDX49Q9Y6V7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
DDX49Q9Y6V7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.73■■■□□ 2.51
DDX49Q9Y6V7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.73■■■□□ 2.51
DDX49Q9Y6V7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
DDX49Q9Y6V7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC30.73■■■□□ 2.51
DDX49Q9Y6V7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
DDX49Q9Y6V7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
DDX49Q9Y6V7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
DDX49Q9Y6V7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.71■■■□□ 2.51
DDX49Q9Y6V7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.71■■■□□ 2.51
DDX49Q9Y6V7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
DDX49Q9Y6V7 AL135925.1-201ENST00000605920 1701 ntBASIC30.7■■■□□ 2.51
DDX49Q9Y6V7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
DDX49Q9Y6V7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
DDX49Q9Y6V7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
DDX49Q9Y6V7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.7■■■□□ 2.51
DDX49Q9Y6V7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.7■■■□□ 2.51
DDX49Q9Y6V7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.7■■■□□ 2.51
DDX49Q9Y6V7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC30.69■■■□□ 2.5
DDX49Q9Y6V7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
DDX49Q9Y6V7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.68■■■□□ 2.5
DDX49Q9Y6V7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
DDX49Q9Y6V7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.67■■■□□ 2.5
DDX49Q9Y6V7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
DDX49Q9Y6V7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
DDX49Q9Y6V7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.67■■■□□ 2.5
DDX49Q9Y6V7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
DDX49Q9Y6V7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
DDX49Q9Y6V7 ZNRF2P2-203ENST00000454624 420 ntBASIC30.66■■■□□ 2.5
DDX49Q9Y6V7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.66■■■□□ 2.5
DDX49Q9Y6V7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
DDX49Q9Y6V7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
DDX49Q9Y6V7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
DDX49Q9Y6V7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
DDX49Q9Y6V7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
DDX49Q9Y6V7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.63■■■□□ 2.49
DDX49Q9Y6V7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
DDX49Q9Y6V7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
DDX49Q9Y6V7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
DDX49Q9Y6V7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
DDX49Q9Y6V7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
DDX49Q9Y6V7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
DDX49Q9Y6V7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.61■■■□□ 2.49
DDX49Q9Y6V7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
DDX49Q9Y6V7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
DDX49Q9Y6V7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
DDX49Q9Y6V7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.6■■■□□ 2.49
DDX49Q9Y6V7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
DDX49Q9Y6V7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
DDX49Q9Y6V7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
DDX49Q9Y6V7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
DDX49Q9Y6V7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.58■■■□□ 2.49
DDX49Q9Y6V7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
DDX49Q9Y6V7 MIR6090-201ENST00000622481 60 ntBASIC30.57■■■□□ 2.48
DDX49Q9Y6V7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
DDX49Q9Y6V7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC30.55■■■□□ 2.48
DDX49Q9Y6V7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.55■■■□□ 2.48
DDX49Q9Y6V7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
DDX49Q9Y6V7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.54■■■□□ 2.48
DDX49Q9Y6V7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
DDX49Q9Y6V7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC30.54■■■□□ 2.48
DDX49Q9Y6V7 AC021231.2-201ENST00000594613 730 ntBASIC30.53■■■□□ 2.48
DDX49Q9Y6V7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
DDX49Q9Y6V7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.52■■■□□ 2.48
DDX49Q9Y6V7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
DDX49Q9Y6V7 HLA-V-202ENST00000446817 847 ntBASIC30.51■■■□□ 2.47
DDX49Q9Y6V7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.5■■■□□ 2.47
DDX49Q9Y6V7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
DDX49Q9Y6V7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
DDX49Q9Y6V7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
DDX49Q9Y6V7 DUX4L29-201ENST00000425409 679 ntBASIC30.49■■■□□ 2.47
DDX49Q9Y6V7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
DDX49Q9Y6V7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
DDX49Q9Y6V7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.48■■■□□ 2.47
DDX49Q9Y6V7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
DDX49Q9Y6V7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms