Protein–RNA interactions for Protein: Q9Y4P8

WIPI2, WD repeat domain phosphoinositide-interacting protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WIPI2Q9Y4P8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
WIPI2Q9Y4P8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.14■■□□□ 1.13
WIPI2Q9Y4P8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
WIPI2Q9Y4P8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
WIPI2Q9Y4P8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.13■■□□□ 1.13
WIPI2Q9Y4P8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
WIPI2Q9Y4P8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
WIPI2Q9Y4P8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
WIPI2Q9Y4P8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
WIPI2Q9Y4P8 AC010864.1-201ENST00000609407 1511 ntBASIC22.12■■□□□ 1.13
WIPI2Q9Y4P8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
WIPI2Q9Y4P8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.12■■□□□ 1.13
WIPI2Q9Y4P8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
WIPI2Q9Y4P8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
WIPI2Q9Y4P8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
WIPI2Q9Y4P8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
WIPI2Q9Y4P8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
WIPI2Q9Y4P8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
WIPI2Q9Y4P8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
WIPI2Q9Y4P8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.1■■□□□ 1.13
WIPI2Q9Y4P8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
WIPI2Q9Y4P8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
WIPI2Q9Y4P8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.09■■□□□ 1.13
WIPI2Q9Y4P8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.09■■□□□ 1.13
WIPI2Q9Y4P8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
WIPI2Q9Y4P8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
WIPI2Q9Y4P8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
WIPI2Q9Y4P8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
WIPI2Q9Y4P8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
WIPI2Q9Y4P8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
WIPI2Q9Y4P8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.08■■□□□ 1.12
WIPI2Q9Y4P8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
WIPI2Q9Y4P8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
WIPI2Q9Y4P8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
WIPI2Q9Y4P8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
WIPI2Q9Y4P8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
WIPI2Q9Y4P8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
WIPI2Q9Y4P8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.05■■□□□ 1.12
WIPI2Q9Y4P8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
WIPI2Q9Y4P8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
WIPI2Q9Y4P8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
WIPI2Q9Y4P8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
WIPI2Q9Y4P8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
WIPI2Q9Y4P8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
WIPI2Q9Y4P8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
WIPI2Q9Y4P8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
WIPI2Q9Y4P8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
WIPI2Q9Y4P8 AC139426.1-201ENST00000568218 2529 ntBASIC22.03■■□□□ 1.12
WIPI2Q9Y4P8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
WIPI2Q9Y4P8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.02■■□□□ 1.12
WIPI2Q9Y4P8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
WIPI2Q9Y4P8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
WIPI2Q9Y4P8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.01■■□□□ 1.11
WIPI2Q9Y4P8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22■■□□□ 1.11
WIPI2Q9Y4P8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22■■□□□ 1.11
WIPI2Q9Y4P8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
WIPI2Q9Y4P8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
WIPI2Q9Y4P8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.99■■□□□ 1.11
WIPI2Q9Y4P8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
WIPI2Q9Y4P8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
WIPI2Q9Y4P8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.98■■□□□ 1.11
WIPI2Q9Y4P8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
WIPI2Q9Y4P8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
WIPI2Q9Y4P8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
WIPI2Q9Y4P8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.97■■□□□ 1.11
WIPI2Q9Y4P8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
WIPI2Q9Y4P8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
WIPI2Q9Y4P8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.96■■□□□ 1.11
WIPI2Q9Y4P8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
WIPI2Q9Y4P8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.95■■□□□ 1.1
WIPI2Q9Y4P8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.95■■□□□ 1.1
WIPI2Q9Y4P8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
WIPI2Q9Y4P8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
WIPI2Q9Y4P8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
WIPI2Q9Y4P8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
WIPI2Q9Y4P8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
WIPI2Q9Y4P8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
WIPI2Q9Y4P8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
WIPI2Q9Y4P8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
WIPI2Q9Y4P8 HLA-V-202ENST00000446817 847 ntBASIC21.93■■□□□ 1.1
WIPI2Q9Y4P8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
WIPI2Q9Y4P8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
WIPI2Q9Y4P8 LINC01971-201ENST00000617888 1048 ntBASIC21.92■■□□□ 1.1
WIPI2Q9Y4P8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
WIPI2Q9Y4P8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
WIPI2Q9Y4P8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.91■■□□□ 1.1
WIPI2Q9Y4P8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
WIPI2Q9Y4P8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.9■■□□□ 1.1
WIPI2Q9Y4P8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.89■■□□□ 1.1
WIPI2Q9Y4P8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
WIPI2Q9Y4P8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
WIPI2Q9Y4P8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.89■■□□□ 1.09
WIPI2Q9Y4P8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
WIPI2Q9Y4P8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.88■■□□□ 1.09
WIPI2Q9Y4P8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.88■■□□□ 1.09
WIPI2Q9Y4P8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.88■■□□□ 1.09
WIPI2Q9Y4P8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
WIPI2Q9Y4P8 DUX4L11-201ENST00000611504 1267 ntBASIC21.87■■□□□ 1.09
WIPI2Q9Y4P8 DUX4L12-201ENST00000614593 1267 ntBASIC21.87■■□□□ 1.09
WIPI2Q9Y4P8 DUX4L14-201ENST00000621227 1267 ntBASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms