Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
BRF2Q9HAW0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.86■■□□□ 1.57
BRF2Q9HAW0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
BRF2Q9HAW0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.85■■□□□ 1.57
BRF2Q9HAW0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
BRF2Q9HAW0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
BRF2Q9HAW0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.84■■□□□ 1.57
BRF2Q9HAW0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.84■■□□□ 1.57
BRF2Q9HAW0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
BRF2Q9HAW0 AC142086.6-201ENST00000621154 1765 ntBASIC24.83■■□□□ 1.57
BRF2Q9HAW0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
BRF2Q9HAW0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.83■■□□□ 1.57
BRF2Q9HAW0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.82■■□□□ 1.56
BRF2Q9HAW0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.82■■□□□ 1.56
BRF2Q9HAW0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.82■■□□□ 1.56
BRF2Q9HAW0 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
BRF2Q9HAW0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
BRF2Q9HAW0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.81■■□□□ 1.56
BRF2Q9HAW0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
BRF2Q9HAW0 DRD5P2-201ENST00000421395 2012 ntBASIC24.79■■□□□ 1.56
BRF2Q9HAW0 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.79■■□□□ 1.56
BRF2Q9HAW0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
BRF2Q9HAW0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.79■■□□□ 1.56
BRF2Q9HAW0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.79■■□□□ 1.56
BRF2Q9HAW0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
BRF2Q9HAW0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
BRF2Q9HAW0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.79■■□□□ 1.56
BRF2Q9HAW0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
BRF2Q9HAW0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.78■■□□□ 1.56
BRF2Q9HAW0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
BRF2Q9HAW0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
BRF2Q9HAW0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.78■■□□□ 1.56
BRF2Q9HAW0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
BRF2Q9HAW0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
BRF2Q9HAW0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
BRF2Q9HAW0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
BRF2Q9HAW0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
BRF2Q9HAW0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.76■■□□□ 1.55
BRF2Q9HAW0 DUX4L28-201ENST00000623687 678 ntBASIC24.76■■□□□ 1.55
BRF2Q9HAW0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
BRF2Q9HAW0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.75■■□□□ 1.55
BRF2Q9HAW0 MIR3665-201ENST00000578708 105 ntBASIC24.75■■□□□ 1.55
BRF2Q9HAW0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
BRF2Q9HAW0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
BRF2Q9HAW0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
BRF2Q9HAW0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
BRF2Q9HAW0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
BRF2Q9HAW0 AC108673.1-201ENST00000510422 1159 ntBASIC24.74■■□□□ 1.55
BRF2Q9HAW0 AP006261.1-201ENST00000584783 668 ntBASIC24.74■■□□□ 1.55
BRF2Q9HAW0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.74■■□□□ 1.55
BRF2Q9HAW0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.74■■□□□ 1.55
BRF2Q9HAW0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.73■■□□□ 1.55
BRF2Q9HAW0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.73■■□□□ 1.55
BRF2Q9HAW0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
BRF2Q9HAW0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.72■■□□□ 1.55
BRF2Q9HAW0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.72■■□□□ 1.55
BRF2Q9HAW0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
BRF2Q9HAW0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
BRF2Q9HAW0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
BRF2Q9HAW0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.7■■□□□ 1.54
BRF2Q9HAW0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
BRF2Q9HAW0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.69■■□□□ 1.54
BRF2Q9HAW0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
BRF2Q9HAW0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
BRF2Q9HAW0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.69■■□□□ 1.54
BRF2Q9HAW0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.69■■□□□ 1.54
BRF2Q9HAW0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
BRF2Q9HAW0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
BRF2Q9HAW0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
BRF2Q9HAW0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
BRF2Q9HAW0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
BRF2Q9HAW0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
BRF2Q9HAW0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
BRF2Q9HAW0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.68■■□□□ 1.54
BRF2Q9HAW0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
BRF2Q9HAW0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
BRF2Q9HAW0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
BRF2Q9HAW0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
BRF2Q9HAW0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
BRF2Q9HAW0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
BRF2Q9HAW0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.64■■□□□ 1.54
BRF2Q9HAW0 MIR6090-201ENST00000622481 60 ntBASIC24.64■■□□□ 1.54
BRF2Q9HAW0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.63■■□□□ 1.53
BRF2Q9HAW0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
BRF2Q9HAW0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
BRF2Q9HAW0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BRF2Q9HAW0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.61■■□□□ 1.53
BRF2Q9HAW0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
BRF2Q9HAW0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
BRF2Q9HAW0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
BRF2Q9HAW0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
BRF2Q9HAW0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
BRF2Q9HAW0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
BRF2Q9HAW0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
BRF2Q9HAW0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.59■■□□□ 1.53
BRF2Q9HAW0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
BRF2Q9HAW0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
BRF2Q9HAW0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.59■■□□□ 1.53
BRF2Q9HAW0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
BRF2Q9HAW0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms