Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
BRF2Q9HAW0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.86■■□□□ 1.57
BRF2Q9HAW0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
BRF2Q9HAW0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.85■■□□□ 1.57
BRF2Q9HAW0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
BRF2Q9HAW0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
BRF2Q9HAW0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.84■■□□□ 1.57
BRF2Q9HAW0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.84■■□□□ 1.57
BRF2Q9HAW0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
BRF2Q9HAW0 AC142086.6-201ENST00000621154 1765 ntBASIC24.83■■□□□ 1.57
BRF2Q9HAW0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
BRF2Q9HAW0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.83■■□□□ 1.57
BRF2Q9HAW0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.82■■□□□ 1.56
BRF2Q9HAW0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.82■■□□□ 1.56
BRF2Q9HAW0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.82■■□□□ 1.56
BRF2Q9HAW0 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
BRF2Q9HAW0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
BRF2Q9HAW0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.81■■□□□ 1.56
BRF2Q9HAW0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
BRF2Q9HAW0 DRD5P2-201ENST00000421395 2012 ntBASIC24.79■■□□□ 1.56
BRF2Q9HAW0 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.79■■□□□ 1.56
BRF2Q9HAW0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
BRF2Q9HAW0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.79■■□□□ 1.56
BRF2Q9HAW0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.79■■□□□ 1.56
BRF2Q9HAW0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
BRF2Q9HAW0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
BRF2Q9HAW0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.79■■□□□ 1.56
BRF2Q9HAW0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
BRF2Q9HAW0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.78■■□□□ 1.56
BRF2Q9HAW0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
BRF2Q9HAW0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
BRF2Q9HAW0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.78■■□□□ 1.56
BRF2Q9HAW0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
BRF2Q9HAW0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
BRF2Q9HAW0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
BRF2Q9HAW0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
BRF2Q9HAW0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
BRF2Q9HAW0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.76■■□□□ 1.55
BRF2Q9HAW0 DUX4L28-201ENST00000623687 678 ntBASIC24.76■■□□□ 1.55
BRF2Q9HAW0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
BRF2Q9HAW0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.75■■□□□ 1.55
BRF2Q9HAW0 MIR3665-201ENST00000578708 105 ntBASIC24.75■■□□□ 1.55
BRF2Q9HAW0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
BRF2Q9HAW0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
BRF2Q9HAW0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
BRF2Q9HAW0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
BRF2Q9HAW0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
BRF2Q9HAW0 AC108673.1-201ENST00000510422 1159 ntBASIC24.74■■□□□ 1.55
BRF2Q9HAW0 AP006261.1-201ENST00000584783 668 ntBASIC24.74■■□□□ 1.55
BRF2Q9HAW0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.74■■□□□ 1.55
BRF2Q9HAW0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.74■■□□□ 1.55
BRF2Q9HAW0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.73■■□□□ 1.55
BRF2Q9HAW0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.73■■□□□ 1.55
BRF2Q9HAW0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
BRF2Q9HAW0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.72■■□□□ 1.55
BRF2Q9HAW0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.72■■□□□ 1.55
BRF2Q9HAW0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
BRF2Q9HAW0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
BRF2Q9HAW0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
BRF2Q9HAW0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.7■■□□□ 1.54
BRF2Q9HAW0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
BRF2Q9HAW0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.69■■□□□ 1.54
BRF2Q9HAW0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
BRF2Q9HAW0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
BRF2Q9HAW0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.69■■□□□ 1.54
BRF2Q9HAW0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.69■■□□□ 1.54
BRF2Q9HAW0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
BRF2Q9HAW0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
BRF2Q9HAW0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
BRF2Q9HAW0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
BRF2Q9HAW0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
BRF2Q9HAW0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
BRF2Q9HAW0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
BRF2Q9HAW0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.68■■□□□ 1.54
BRF2Q9HAW0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
BRF2Q9HAW0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
BRF2Q9HAW0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
BRF2Q9HAW0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
BRF2Q9HAW0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
BRF2Q9HAW0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
BRF2Q9HAW0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.64■■□□□ 1.54
BRF2Q9HAW0 MIR6090-201ENST00000622481 60 ntBASIC24.64■■□□□ 1.54
BRF2Q9HAW0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.63■■□□□ 1.53
BRF2Q9HAW0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
BRF2Q9HAW0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
BRF2Q9HAW0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BRF2Q9HAW0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.61■■□□□ 1.53
BRF2Q9HAW0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
BRF2Q9HAW0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
BRF2Q9HAW0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
BRF2Q9HAW0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
BRF2Q9HAW0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
BRF2Q9HAW0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
BRF2Q9HAW0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
BRF2Q9HAW0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.59■■□□□ 1.53
BRF2Q9HAW0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
BRF2Q9HAW0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
BRF2Q9HAW0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.59■■□□□ 1.53
BRF2Q9HAW0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
BRF2Q9HAW0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms