Protein–RNA interactions for Protein: Q99315

TY3B-G, Transposon Ty3-G Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,547 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY3B-GQ99315 tL(UAA)KtL(UAA)K 84 nt12.4□□□□□ -0.42
TY3B-GQ99315 tL(UAA)LtL(UAA)L 84 nt12.4□□□□□ -0.42
TY3B-GQ99315 tL(UAA)NtL(UAA)N 84 nt12.4□□□□□ -0.42
TY3B-GQ99315 CRC1YOR100C 984 nt12.4□□□□□ -0.42
TY3B-GQ99315 YMR210WYMR210W 1350 nt12.39□□□□□ -0.43
TY3B-GQ99315 YPL108WYPL108W 507 nt12.37□□□□□ -0.43
TY3B-GQ99315 ARO8YGL202W 1503 nt12.36□□□□□ -0.43
TY3B-GQ99315 SRP54YPR088C 1626 nt12.35□□□□□ -0.43
TY3B-GQ99315 HAP5YOR358W 729 nt12.35□□□□□ -0.43
TY3B-GQ99315 KEL3YPL263C 1956 nt12.34□□□□□ -0.43
TY3B-GQ99315 YMR265CYMR265C 1386 nt12.33□□□□□ -0.44
TY3B-GQ99315 VMA11YPL234C 495 nt12.32□□□□□ -0.44
TY3B-GQ99315 RIM2YBR192W 1134 nt12.32□□□□□ -0.44
TY3B-GQ99315 ELP4YPL101W 1371 nt12.32□□□□□ -0.44
TY3B-GQ99315 KES1YPL145C 1305 nt12.3□□□□□ -0.44
TY3B-GQ99315 YHR219WYHR219W 1875 nt12.29□□□□□ -0.44
TY3B-GQ99315 EDC2YER035W 438 nt12.29□□□□□ -0.44
TY3B-GQ99315 YKL133CYKL133C 1392 nt12.29□□□□□ -0.44
TY3B-GQ99315 MUP1YGR055W 1725 nt12.28□□□□□ -0.44
TY3B-GQ99315 YJR149WYJR149W 1215 nt12.27□□□□□ -0.44
TY3B-GQ99315 SDH8YBR269C 417 nt12.27□□□□□ -0.44
TY3B-GQ99315 SAN1YDR143C 1833 nt12.27□□□□□ -0.44
TY3B-GQ99315 LSP1YPL004C 1026 nt12.27□□□□□ -0.45
TY3B-GQ99315 COQ8YGL119W 1506 nt12.25□□□□□ -0.45
TY3B-GQ99315 SPT20YOL148C 1815 nt12.22□□□□□ -0.45
TY3B-GQ99315 KGD2YDR148C 1392 nt12.22□□□□□ -0.45
TY3B-GQ99315 BAP3YDR046C 1815 nt12.21□□□□□ -0.45
TY3B-GQ99315 ADA2YDR448W 1305 nt12.2□□□□□ -0.46
TY3B-GQ99315 YPL247CYPL247C 1572 nt12.2□□□□□ -0.46
TY3B-GQ99315 PRE5YMR314W 705 nt12.2□□□□□ -0.46
TY3B-GQ99315 YMR166CYMR166C 1107 nt12.19□□□□□ -0.46
TY3B-GQ99315 SNX3YOR357C 489 nt12.18□□□□□ -0.46
TY3B-GQ99315 PTC6YCR079W 1329 nt12.17□□□□□ -0.46
TY3B-GQ99315 HOL1YNR055C 1761 nt12.16□□□□□ -0.46
TY3B-GQ99315 snR31snR31 225 nt12.14□□□□□ -0.47
TY3B-GQ99315 SGA1YIL099W 1650 nt12.14□□□□□ -0.47
TY3B-GQ99315 RPS6AYPL090C 711 nt12.1□□□□□ -0.47
TY3B-GQ99315 RPS6BYBR181C 711 nt12.1□□□□□ -0.47
TY3B-GQ99315 MRP1YDR347W 966 nt12.09□□□□□ -0.47
TY3B-GQ99315 RPN14YGL004C 1254 nt12.07□□□□□ -0.48
TY3B-GQ99315 UGP1YKL035W 1500 nt12.07□□□□□ -0.48
TY3B-GQ99315 YPT11YNL304W 1254 nt12.06□□□□□ -0.48
TY3B-GQ99315 GAS1YMR307W 1680 nt12.06□□□□□ -0.48
TY3B-GQ99315 ZAP1YJL056C 2643 nt12.05□□□□□ -0.48
TY3B-GQ99315 UME6YDR207C 2511 nt12.04□□□□□ -0.48
TY3B-GQ99315 YFR020WYFR020W 699 nt12.04□□□□□ -0.48
TY3B-GQ99315 ADE1YAR015W 921 nt12.03□□□□□ -0.48
TY3B-GQ99315 BXI1YNL305C 894 nt12.03□□□□□ -0.48
TY3B-GQ99315 RPD3YNL330C 1302 nt12□□□□□ -0.49
TY3B-GQ99315 SBP1YHL034C 885 nt12□□□□□ -0.49
TY3B-GQ99315 RSM7YJR113C 744 nt11.98□□□□□ -0.49
TY3B-GQ99315 CAK1YFL029C 1107 nt11.97□□□□□ -0.49
TY3B-GQ99315 GDH1YOR375C 1365 nt11.97□□□□□ -0.49
TY3B-GQ99315 CMP2YML057W 1815 nt11.96□□□□□ -0.49
TY3B-GQ99315 OCH1YGL038C 1443 nt11.95□□□□□ -0.5
TY3B-GQ99315 MFT1YML062C 1179 nt11.95□□□□□ -0.5
TY3B-GQ99315 SHC1YER096W 1539 nt11.95□□□□□ -0.5
TY3B-GQ99315 YER156CYER156C 1017 nt11.94□□□□□ -0.5
TY3B-GQ99315 YIL168WYIL168W 384 nt11.94□□□□□ -0.5
TY3B-GQ99315 SSL2YIL143C 2532 nt11.93□□□□□ -0.5
TY3B-GQ99315 THI3YDL080C 1830 nt11.93□□□□□ -0.5
TY3B-GQ99315 NCA3YJL116C 1014 nt11.93□□□□□ -0.5
TY3B-GQ99315 RPC31YNL151C 756 nt11.92□□□□□ -0.5
TY3B-GQ99315 MET22YOL064C 1074 nt11.92□□□□□ -0.5
TY3B-GQ99315 ODC1YPL134C 933 nt11.91□□□□□ -0.5
TY3B-GQ99315 YJL043WYJL043W 774 nt11.89□□□□□ -0.51
TY3B-GQ99315 TAD2YJL035C 753 nt11.88□□□□□ -0.51
TY3B-GQ99315 TDH1YJL052W 999 nt11.86□□□□□ -0.51
TY3B-GQ99315 YMR316C-BYMR316C-B 309 nt11.86□□□□□ -0.51
TY3B-GQ99315 PET494YNR045W 1470 nt11.85□□□□□ -0.51
TY3B-GQ99315 DPL1YDR294C 1770 nt11.84□□□□□ -0.51
TY3B-GQ99315 CHS7YHR142W 951 nt11.83□□□□□ -0.52
TY3B-GQ99315 FUS3YBL016W 1062 nt11.83□□□□□ -0.52
TY3B-GQ99315 RNA170RNA170 169 nt11.83□□□□□ -0.52
TY3B-GQ99315 HAC1YFL031W 717 nt11.82□□□□□ -0.52
TY3B-GQ99315 NUP53YMR153W 1428 nt11.82□□□□□ -0.52
TY3B-GQ99315 GPM1YKL152C 744 nt11.81□□□□□ -0.52
TY3B-GQ99315 COS10YNR075W 1125 nt11.81□□□□□ -0.52
TY3B-GQ99315 RHO1YPR165W 630 nt11.81□□□□□ -0.52
TY3B-GQ99315 YPR084WYPR084W 1371 nt11.8□□□□□ -0.52
TY3B-GQ99315 YLR460CYLR460C 1131 nt11.8□□□□□ -0.52
TY3B-GQ99315 GGA2YHR108W 1758 nt11.79□□□□□ -0.52
TY3B-GQ99315 YDR467CYDR467C 327 nt11.79□□□□□ -0.52
TY3B-GQ99315 RRT14YIL127C 621 nt11.77□□□□□ -0.52
TY3B-GQ99315 RRT6YGL146C 936 nt11.76□□□□□ -0.53
TY3B-GQ99315 PDC6YGR087C 1692 nt11.76□□□□□ -0.53
TY3B-GQ99315 YLR358CYLR358C 564 nt11.76□□□□□ -0.53
TY3B-GQ99315 CWP2YKL096W-A 279 nt11.73□□□□□ -0.53
TY3B-GQ99315 LEU4YNL104C 1860 nt11.72□□□□□ -0.53
TY3B-GQ99315 THI73YLR004C 1572 nt11.72□□□□□ -0.53
TY3B-GQ99315 HIS2YFR025C 1008 nt11.71□□□□□ -0.53
TY3B-GQ99315 APT1YML022W 564 nt11.7□□□□□ -0.54
TY3B-GQ99315 MEP1YGR121C 1479 nt11.7□□□□□ -0.54
TY3B-GQ99315 YBL095WYBL095W 813 nt11.7□□□□□ -0.54
TY3B-GQ99315 AAC3YBR085W 924 nt11.69□□□□□ -0.54
TY3B-GQ99315 tE(CUC)DtE(CUC)D 72 nt11.68□□□□□ -0.54
TY3B-GQ99315 tE(CUC)ItE(CUC)I 72 nt11.68□□□□□ -0.54
TY3B-GQ99315 YJL009WYJL009W 327 nt11.67□□□□□ -0.54
TY3B-GQ99315 YPT31YER031C 672 nt11.65□□□□□ -0.54
TY3B-GQ99315 OLA1YBR025C 1185 nt11.65□□□□□ -0.55
Retrieved 100 of 7,029 protein–RNA pairs in 67.7 ms