Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
CSMD1Q96PZ7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.56■■□□□ 1.2
CSMD1Q96PZ7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CSMD1Q96PZ7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CSMD1Q96PZ7 AC004987.1-201ENST00000428627 508 ntBASIC22.55■■□□□ 1.2
CSMD1Q96PZ7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CSMD1Q96PZ7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CSMD1Q96PZ7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CSMD1Q96PZ7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CSMD1Q96PZ7 U85056.1-201ENST00000616429 682 ntBASIC22.54■■□□□ 1.2
CSMD1Q96PZ7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.53■■□□□ 1.2
CSMD1Q96PZ7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CSMD1Q96PZ7 AL451085.2-201ENST00000605085 799 ntBASIC22.53■■□□□ 1.2
CSMD1Q96PZ7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.53■■□□□ 1.2
CSMD1Q96PZ7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.52■■□□□ 1.2
CSMD1Q96PZ7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CSMD1Q96PZ7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CSMD1Q96PZ7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CSMD1Q96PZ7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CSMD1Q96PZ7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC22.51■■□□□ 1.19
CSMD1Q96PZ7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.51■■□□□ 1.19
CSMD1Q96PZ7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.51■■□□□ 1.19
CSMD1Q96PZ7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
CSMD1Q96PZ7 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC22.5■■□□□ 1.19
CSMD1Q96PZ7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.5■■□□□ 1.19
CSMD1Q96PZ7 AC022413.1-201ENST00000624602 984 ntBASIC22.5■■□□□ 1.19
CSMD1Q96PZ7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.5■■□□□ 1.19
CSMD1Q96PZ7 MIR935-201ENST00000401179 91 ntBASIC22.49■■□□□ 1.19
CSMD1Q96PZ7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC22.49■■□□□ 1.19
CSMD1Q96PZ7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CSMD1Q96PZ7 ATP5G2P3-201ENST00000429083 425 ntBASIC22.48■■□□□ 1.19
CSMD1Q96PZ7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.48■■□□□ 1.19
CSMD1Q96PZ7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CSMD1Q96PZ7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
CSMD1Q96PZ7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CSMD1Q96PZ7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC22.46■■□□□ 1.19
CSMD1Q96PZ7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
CSMD1Q96PZ7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.45■■□□□ 1.19
CSMD1Q96PZ7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CSMD1Q96PZ7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.45■■□□□ 1.18
CSMD1Q96PZ7 KRT18P60-201ENST00000312876 1297 ntBASIC22.44■■□□□ 1.18
CSMD1Q96PZ7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CSMD1Q96PZ7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.44■■□□□ 1.18
CSMD1Q96PZ7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CSMD1Q96PZ7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.43■■□□□ 1.18
CSMD1Q96PZ7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CSMD1Q96PZ7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CSMD1Q96PZ7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CSMD1Q96PZ7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.41■■□□□ 1.18
CSMD1Q96PZ7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CSMD1Q96PZ7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC22.38■■□□□ 1.17
CSMD1Q96PZ7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CSMD1Q96PZ7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
CSMD1Q96PZ7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CSMD1Q96PZ7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CSMD1Q96PZ7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.37■■□□□ 1.17
CSMD1Q96PZ7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.36■■□□□ 1.17
CSMD1Q96PZ7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CSMD1Q96PZ7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.36■■□□□ 1.17
CSMD1Q96PZ7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CSMD1Q96PZ7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CSMD1Q96PZ7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CSMD1Q96PZ7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CSMD1Q96PZ7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CSMD1Q96PZ7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.35■■□□□ 1.17
CSMD1Q96PZ7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.35■■□□□ 1.17
CSMD1Q96PZ7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
CSMD1Q96PZ7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSMD1Q96PZ7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.34■■□□□ 1.17
CSMD1Q96PZ7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSMD1Q96PZ7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSMD1Q96PZ7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CSMD1Q96PZ7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CSMD1Q96PZ7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
CSMD1Q96PZ7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.32■■□□□ 1.16
CSMD1Q96PZ7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CSMD1Q96PZ7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.32■■□□□ 1.16
CSMD1Q96PZ7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.31■■□□□ 1.16
CSMD1Q96PZ7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.31■■□□□ 1.16
CSMD1Q96PZ7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.3■■□□□ 1.16
CSMD1Q96PZ7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CSMD1Q96PZ7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.3■■□□□ 1.16
CSMD1Q96PZ7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSMD1Q96PZ7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSMD1Q96PZ7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CSMD1Q96PZ7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CSMD1Q96PZ7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CSMD1Q96PZ7 AC060814.1-201ENST00000554326 538 ntBASIC22.29■■□□□ 1.16
CSMD1Q96PZ7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CSMD1Q96PZ7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
CSMD1Q96PZ7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CSMD1Q96PZ7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
CSMD1Q96PZ7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.28■■□□□ 1.16
CSMD1Q96PZ7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.28■■□□□ 1.16
CSMD1Q96PZ7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.15
CSMD1Q96PZ7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.26■■□□□ 1.15
CSMD1Q96PZ7 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.26■■□□□ 1.15
CSMD1Q96PZ7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CSMD1Q96PZ7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSMD1Q96PZ7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms