Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.62■■□□□ 1.85
KDM1BQ8NB78 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
KDM1BQ8NB78 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
KDM1BQ8NB78 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
KDM1BQ8NB78 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
KDM1BQ8NB78 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.61■■□□□ 1.85
KDM1BQ8NB78 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
KDM1BQ8NB78 DUX4L11-201ENST00000611504 1267 ntBASIC26.6■■□□□ 1.85
KDM1BQ8NB78 DUX4L12-201ENST00000614593 1267 ntBASIC26.6■■□□□ 1.85
KDM1BQ8NB78 DUX4L14-201ENST00000621227 1267 ntBASIC26.6■■□□□ 1.85
KDM1BQ8NB78 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
KDM1BQ8NB78 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.59■■□□□ 1.85
KDM1BQ8NB78 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
KDM1BQ8NB78 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
KDM1BQ8NB78 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
KDM1BQ8NB78 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.58■■□□□ 1.85
KDM1BQ8NB78 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
KDM1BQ8NB78 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.57■■□□□ 1.84
KDM1BQ8NB78 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.57■■□□□ 1.84
KDM1BQ8NB78 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.57■■□□□ 1.84
KDM1BQ8NB78 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.57■■□□□ 1.84
KDM1BQ8NB78 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
KDM1BQ8NB78 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.56■■□□□ 1.84
KDM1BQ8NB78 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.56■■□□□ 1.84
KDM1BQ8NB78 ABCB10P3-201ENST00000561950 2166 ntBASIC26.56■■□□□ 1.84
KDM1BQ8NB78 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
KDM1BQ8NB78 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
KDM1BQ8NB78 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
KDM1BQ8NB78 MIR3648-2-201ENST00000581792 180 ntBASIC26.54■■□□□ 1.84
KDM1BQ8NB78 MIR3648-1-201ENST00000615959 180 ntBASIC26.54■■□□□ 1.84
KDM1BQ8NB78 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
KDM1BQ8NB78 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
KDM1BQ8NB78 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
KDM1BQ8NB78 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
KDM1BQ8NB78 MIR639-201ENST00000384974 98 ntBASIC26.52■■□□□ 1.84
KDM1BQ8NB78 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
KDM1BQ8NB78 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
KDM1BQ8NB78 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.51■■□□□ 1.83
KDM1BQ8NB78 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.51■■□□□ 1.83
KDM1BQ8NB78 AL135925.1-201ENST00000605920 1701 ntBASIC26.51■■□□□ 1.83
KDM1BQ8NB78 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
KDM1BQ8NB78 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
KDM1BQ8NB78 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
KDM1BQ8NB78 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
KDM1BQ8NB78 LINC00273-201ENST00000539813 1452 ntBASIC26.49■■□□□ 1.83
KDM1BQ8NB78 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
KDM1BQ8NB78 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
KDM1BQ8NB78 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.48■■□□□ 1.83
KDM1BQ8NB78 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.48■■□□□ 1.83
KDM1BQ8NB78 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
KDM1BQ8NB78 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.48■■□□□ 1.83
KDM1BQ8NB78 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.48■■□□□ 1.83
KDM1BQ8NB78 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
KDM1BQ8NB78 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
KDM1BQ8NB78 DUX4L13-201ENST00000554103 1267 ntBASIC26.47■■□□□ 1.83
KDM1BQ8NB78 DUX4L15-201ENST00000611059 1267 ntBASIC26.47■■□□□ 1.83
KDM1BQ8NB78 DUX4L23-201ENST00000615195 1269 ntBASIC26.47■■□□□ 1.83
KDM1BQ8NB78 DUX4L24-201ENST00000617576 1269 ntBASIC26.47■■□□□ 1.83
KDM1BQ8NB78 DUX4L22-201ENST00000618238 1269 ntBASIC26.47■■□□□ 1.83
KDM1BQ8NB78 DUX4L20-201ENST00000619712 1269 ntBASIC26.47■■□□□ 1.83
KDM1BQ8NB78 DUX4L21-201ENST00000622058 1269 ntBASIC26.47■■□□□ 1.83
KDM1BQ8NB78 DUX4L10-201ENST00000622460 1267 ntBASIC26.47■■□□□ 1.83
KDM1BQ8NB78 CR559946.2-201ENST00000623684 991 ntBASIC26.47■■□□□ 1.83
KDM1BQ8NB78 DUX4L25-201ENST00000624915 1269 ntBASIC26.47■■□□□ 1.83
KDM1BQ8NB78 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
KDM1BQ8NB78 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
KDM1BQ8NB78 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
KDM1BQ8NB78 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.46■■□□□ 1.83
KDM1BQ8NB78 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.46■■□□□ 1.83
KDM1BQ8NB78 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.45■■□□□ 1.82
KDM1BQ8NB78 AC016575.1-201ENST00000607026 382 ntBASIC26.45■■□□□ 1.82
KDM1BQ8NB78 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
KDM1BQ8NB78 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
KDM1BQ8NB78 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
KDM1BQ8NB78 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
KDM1BQ8NB78 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.44■■□□□ 1.82
KDM1BQ8NB78 MIR4449-201ENST00000578365 66 ntBASIC26.44■■□□□ 1.82
KDM1BQ8NB78 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
KDM1BQ8NB78 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
KDM1BQ8NB78 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
KDM1BQ8NB78 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.42■■□□□ 1.82
KDM1BQ8NB78 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
KDM1BQ8NB78 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
KDM1BQ8NB78 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
KDM1BQ8NB78 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.41■■□□□ 1.82
KDM1BQ8NB78 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
KDM1BQ8NB78 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.4■■□□□ 1.82
KDM1BQ8NB78 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
KDM1BQ8NB78 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
KDM1BQ8NB78 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.39■■□□□ 1.82
KDM1BQ8NB78 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
KDM1BQ8NB78 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KDM1BQ8NB78 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KDM1BQ8NB78 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.38■■□□□ 1.81
KDM1BQ8NB78 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
KDM1BQ8NB78 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
KDM1BQ8NB78 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
KDM1BQ8NB78 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
KDM1BQ8NB78 AC127502.1-201ENST00000399971 1502 ntBASIC26.36■■□□□ 1.81
KDM1BQ8NB78 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms