Protein–RNA interactions for Protein: Q8N112

LSMEM2, Leucine-rich single-pass membrane protein 2, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM2Q8N112 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.95■■□□□ 1.74
LSMEM2Q8N112 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.95■■□□□ 1.74
LSMEM2Q8N112 MIR4449-201ENST00000578365 66 ntBASIC25.95■■□□□ 1.74
LSMEM2Q8N112 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
LSMEM2Q8N112 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
LSMEM2Q8N112 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
LSMEM2Q8N112 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
LSMEM2Q8N112 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
LSMEM2Q8N112 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
LSMEM2Q8N112 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
LSMEM2Q8N112 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
LSMEM2Q8N112 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.93■■□□□ 1.74
LSMEM2Q8N112 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
LSMEM2Q8N112 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
LSMEM2Q8N112 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
LSMEM2Q8N112 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
LSMEM2Q8N112 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
LSMEM2Q8N112 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
LSMEM2Q8N112 MIR639-201ENST00000384974 98 ntBASIC25.91■■□□□ 1.74
LSMEM2Q8N112 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.91■■□□□ 1.74
LSMEM2Q8N112 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
LSMEM2Q8N112 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
LSMEM2Q8N112 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
LSMEM2Q8N112 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.89■■□□□ 1.74
LSMEM2Q8N112 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
LSMEM2Q8N112 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.73
LSMEM2Q8N112 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
LSMEM2Q8N112 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
LSMEM2Q8N112 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.88■■□□□ 1.73
LSMEM2Q8N112 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.88■■□□□ 1.73
LSMEM2Q8N112 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
LSMEM2Q8N112 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
LSMEM2Q8N112 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
LSMEM2Q8N112 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
LSMEM2Q8N112 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.86■■□□□ 1.73
LSMEM2Q8N112 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
LSMEM2Q8N112 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LSMEM2Q8N112 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
LSMEM2Q8N112 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
LSMEM2Q8N112 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.84■■□□□ 1.73
LSMEM2Q8N112 AC021231.2-201ENST00000594613 730 ntBASIC25.84■■□□□ 1.73
LSMEM2Q8N112 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
LSMEM2Q8N112 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.83■■□□□ 1.72
LSMEM2Q8N112 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
LSMEM2Q8N112 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
LSMEM2Q8N112 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
LSMEM2Q8N112 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
LSMEM2Q8N112 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.82■■□□□ 1.72
LSMEM2Q8N112 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
LSMEM2Q8N112 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
LSMEM2Q8N112 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
LSMEM2Q8N112 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
LSMEM2Q8N112 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
LSMEM2Q8N112 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.8■■□□□ 1.72
LSMEM2Q8N112 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
LSMEM2Q8N112 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
LSMEM2Q8N112 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
LSMEM2Q8N112 AC108673.1-201ENST00000510422 1159 ntBASIC25.78■■□□□ 1.72
LSMEM2Q8N112 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.78■■□□□ 1.72
LSMEM2Q8N112 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.78■■□□□ 1.72
LSMEM2Q8N112 AL139393.2-201ENST00000608721 2025 ntBASIC25.78■■□□□ 1.72
LSMEM2Q8N112 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
LSMEM2Q8N112 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LSMEM2Q8N112 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.77■■□□□ 1.72
LSMEM2Q8N112 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
LSMEM2Q8N112 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LSMEM2Q8N112 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.77■■□□□ 1.72
LSMEM2Q8N112 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
LSMEM2Q8N112 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LSMEM2Q8N112 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.76■■□□□ 1.72
LSMEM2Q8N112 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.76■■□□□ 1.71
LSMEM2Q8N112 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.76■■□□□ 1.71
LSMEM2Q8N112 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.76■■□□□ 1.71
LSMEM2Q8N112 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LSMEM2Q8N112 AC142086.6-201ENST00000621154 1765 ntBASIC25.75■■□□□ 1.71
LSMEM2Q8N112 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.75■■□□□ 1.71
LSMEM2Q8N112 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
LSMEM2Q8N112 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
LSMEM2Q8N112 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.74■■□□□ 1.71
LSMEM2Q8N112 MIR3648-2-201ENST00000581792 180 ntBASIC25.74■■□□□ 1.71
LSMEM2Q8N112 MIR3648-1-201ENST00000615959 180 ntBASIC25.74■■□□□ 1.71
LSMEM2Q8N112 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.74■■□□□ 1.71
LSMEM2Q8N112 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
LSMEM2Q8N112 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
LSMEM2Q8N112 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
LSMEM2Q8N112 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
LSMEM2Q8N112 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.73■■□□□ 1.71
LSMEM2Q8N112 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.73■■□□□ 1.71
LSMEM2Q8N112 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
LSMEM2Q8N112 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
LSMEM2Q8N112 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.72■■□□□ 1.71
LSMEM2Q8N112 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LSMEM2Q8N112 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LSMEM2Q8N112 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
LSMEM2Q8N112 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
LSMEM2Q8N112 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.71■■□□□ 1.71
LSMEM2Q8N112 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.71■■□□□ 1.71
LSMEM2Q8N112 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
LSMEM2Q8N112 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
LSMEM2Q8N112 AC016575.1-201ENST00000607026 382 ntBASIC25.7■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms