Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CPNE9Q8IYJ1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.61■■□□□ 1.69
CPNE9Q8IYJ1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.61■■□□□ 1.69
CPNE9Q8IYJ1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
CPNE9Q8IYJ1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.6■■□□□ 1.69
CPNE9Q8IYJ1 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
CPNE9Q8IYJ1 AC127502.1-201ENST00000399971 1502 ntBASIC25.6■■□□□ 1.69
CPNE9Q8IYJ1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CPNE9Q8IYJ1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.59■■□□□ 1.69
CPNE9Q8IYJ1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.59■■□□□ 1.69
CPNE9Q8IYJ1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.59■■□□□ 1.69
CPNE9Q8IYJ1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CPNE9Q8IYJ1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CPNE9Q8IYJ1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CPNE9Q8IYJ1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.58■■□□□ 1.69
CPNE9Q8IYJ1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.57■■□□□ 1.68
CPNE9Q8IYJ1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.57■■□□□ 1.68
CPNE9Q8IYJ1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CPNE9Q8IYJ1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CPNE9Q8IYJ1 MIR3665-201ENST00000578708 105 ntBASIC25.56■■□□□ 1.68
CPNE9Q8IYJ1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CPNE9Q8IYJ1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
CPNE9Q8IYJ1 AP006261.1-201ENST00000584783 668 ntBASIC25.55■■□□□ 1.68
CPNE9Q8IYJ1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
CPNE9Q8IYJ1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CPNE9Q8IYJ1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CPNE9Q8IYJ1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.54■■□□□ 1.68
CPNE9Q8IYJ1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
CPNE9Q8IYJ1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CPNE9Q8IYJ1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CPNE9Q8IYJ1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CPNE9Q8IYJ1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.52■■□□□ 1.68
CPNE9Q8IYJ1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CPNE9Q8IYJ1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CPNE9Q8IYJ1 AL162393.1-201ENST00000437852 946 ntBASIC25.5■■□□□ 1.67
CPNE9Q8IYJ1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.5■■□□□ 1.67
CPNE9Q8IYJ1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
CPNE9Q8IYJ1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CPNE9Q8IYJ1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CPNE9Q8IYJ1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CPNE9Q8IYJ1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CPNE9Q8IYJ1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CPNE9Q8IYJ1 AC108673.1-201ENST00000510422 1159 ntBASIC25.48■■□□□ 1.67
CPNE9Q8IYJ1 MIR6090-201ENST00000622481 60 ntBASIC25.48■■□□□ 1.67
CPNE9Q8IYJ1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CPNE9Q8IYJ1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CPNE9Q8IYJ1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.47■■□□□ 1.67
CPNE9Q8IYJ1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CPNE9Q8IYJ1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.47■■□□□ 1.67
CPNE9Q8IYJ1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CPNE9Q8IYJ1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CPNE9Q8IYJ1 AC087741.3-201ENST00000624270 1347 ntBASIC25.44■■□□□ 1.66
CPNE9Q8IYJ1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.44■■□□□ 1.66
CPNE9Q8IYJ1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.44■■□□□ 1.66
CPNE9Q8IYJ1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
CPNE9Q8IYJ1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
CPNE9Q8IYJ1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CPNE9Q8IYJ1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CPNE9Q8IYJ1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.42■■□□□ 1.66
CPNE9Q8IYJ1 DRD5P2-201ENST00000421395 2012 ntBASIC25.42■■□□□ 1.66
CPNE9Q8IYJ1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
CPNE9Q8IYJ1 AP004833.2-201ENST00000532228 1454 ntBASIC25.41■■□□□ 1.66
CPNE9Q8IYJ1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CPNE9Q8IYJ1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
CPNE9Q8IYJ1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CPNE9Q8IYJ1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.4■■□□□ 1.66
CPNE9Q8IYJ1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CPNE9Q8IYJ1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
CPNE9Q8IYJ1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
CPNE9Q8IYJ1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CPNE9Q8IYJ1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
CPNE9Q8IYJ1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
CPNE9Q8IYJ1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.37■■□□□ 1.65
CPNE9Q8IYJ1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.37■■□□□ 1.65
CPNE9Q8IYJ1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
CPNE9Q8IYJ1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CPNE9Q8IYJ1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CPNE9Q8IYJ1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
CPNE9Q8IYJ1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CPNE9Q8IYJ1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
CPNE9Q8IYJ1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CPNE9Q8IYJ1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CPNE9Q8IYJ1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.35■■□□□ 1.65
CPNE9Q8IYJ1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.35■■□□□ 1.65
CPNE9Q8IYJ1 AC142086.6-201ENST00000621154 1765 ntBASIC25.35■■□□□ 1.65
CPNE9Q8IYJ1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CPNE9Q8IYJ1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CPNE9Q8IYJ1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CPNE9Q8IYJ1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CPNE9Q8IYJ1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.34■■□□□ 1.65
CPNE9Q8IYJ1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.34■■□□□ 1.65
CPNE9Q8IYJ1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
CPNE9Q8IYJ1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CPNE9Q8IYJ1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CPNE9Q8IYJ1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.32■■□□□ 1.64
CPNE9Q8IYJ1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CPNE9Q8IYJ1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
CPNE9Q8IYJ1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CPNE9Q8IYJ1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CPNE9Q8IYJ1 AC044849.2-201ENST00000606596 710 ntBASIC25.31■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms