Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.73■■■□□ 2.51
COL13A1Q5TAT6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
COL13A1Q5TAT6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.72■■■□□ 2.51
COL13A1Q5TAT6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC30.72■■■□□ 2.51
COL13A1Q5TAT6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC30.72■■■□□ 2.51
COL13A1Q5TAT6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
COL13A1Q5TAT6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
COL13A1Q5TAT6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC30.68■■■□□ 2.5
COL13A1Q5TAT6 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.67■■■□□ 2.5
COL13A1Q5TAT6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
COL13A1Q5TAT6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
COL13A1Q5TAT6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.65■■■□□ 2.5
COL13A1Q5TAT6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
COL13A1Q5TAT6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
COL13A1Q5TAT6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
COL13A1Q5TAT6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC30.63■■■□□ 2.49
COL13A1Q5TAT6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
COL13A1Q5TAT6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
COL13A1Q5TAT6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC30.62■■■□□ 2.49
COL13A1Q5TAT6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC30.61■■■□□ 2.49
COL13A1Q5TAT6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
COL13A1Q5TAT6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.6■■■□□ 2.49
COL13A1Q5TAT6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.59■■■□□ 2.49
COL13A1Q5TAT6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
COL13A1Q5TAT6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC30.59■■■□□ 2.49
COL13A1Q5TAT6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
COL13A1Q5TAT6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.58■■■□□ 2.49
COL13A1Q5TAT6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC30.57■■■□□ 2.48
COL13A1Q5TAT6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.57■■■□□ 2.48
COL13A1Q5TAT6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
COL13A1Q5TAT6 HES6-204ENST00000409182 863 ntTSL 2 BASIC30.56■■■□□ 2.48
COL13A1Q5TAT6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC30.56■■■□□ 2.48
COL13A1Q5TAT6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC30.55■■■□□ 2.48
COL13A1Q5TAT6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
COL13A1Q5TAT6 AC009299.2-201ENST00000482477 511 ntBASIC30.54■■■□□ 2.48
COL13A1Q5TAT6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
COL13A1Q5TAT6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
COL13A1Q5TAT6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
COL13A1Q5TAT6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
COL13A1Q5TAT6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
COL13A1Q5TAT6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.53■■■□□ 2.48
COL13A1Q5TAT6 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.53■■■□□ 2.48
COL13A1Q5TAT6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.53■■■□□ 2.48
COL13A1Q5TAT6 GUSBP5-201ENST00000418136 578 ntBASIC30.52■■■□□ 2.48
COL13A1Q5TAT6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC30.51■■■□□ 2.47
COL13A1Q5TAT6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
COL13A1Q5TAT6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC30.5■■■□□ 2.47
COL13A1Q5TAT6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC30.5■■■□□ 2.47
COL13A1Q5TAT6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
COL13A1Q5TAT6 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
COL13A1Q5TAT6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC30.48■■■□□ 2.47
COL13A1Q5TAT6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
COL13A1Q5TAT6 DUX4L18-201ENST00000553347 1267 ntBASIC30.48■■■□□ 2.47
COL13A1Q5TAT6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
COL13A1Q5TAT6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
COL13A1Q5TAT6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
COL13A1Q5TAT6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
COL13A1Q5TAT6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
COL13A1Q5TAT6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC30.46■■■□□ 2.47
COL13A1Q5TAT6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC30.45■■■□□ 2.47
COL13A1Q5TAT6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.45■■■□□ 2.47
COL13A1Q5TAT6 AC092666.2-201ENST00000613287 246 ntBASIC30.45■■■□□ 2.47
COL13A1Q5TAT6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
COL13A1Q5TAT6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
COL13A1Q5TAT6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
COL13A1Q5TAT6 OR2A1-AS1-204ENST00000470435 602 ntBASIC30.41■■■□□ 2.46
COL13A1Q5TAT6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC30.41■■■□□ 2.46
COL13A1Q5TAT6 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
COL13A1Q5TAT6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.39■■■□□ 2.46
COL13A1Q5TAT6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
COL13A1Q5TAT6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
COL13A1Q5TAT6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC30.39■■■□□ 2.46
COL13A1Q5TAT6 AL356441.2-201ENST00000443009 864 ntBASIC30.38■■■□□ 2.45
COL13A1Q5TAT6 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
COL13A1Q5TAT6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
COL13A1Q5TAT6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
COL13A1Q5TAT6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
COL13A1Q5TAT6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
COL13A1Q5TAT6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
COL13A1Q5TAT6 AC008406.3-201ENST00000620001 1374 ntBASIC30.37■■■□□ 2.45
COL13A1Q5TAT6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
COL13A1Q5TAT6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC30.36■■■□□ 2.45
COL13A1Q5TAT6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
COL13A1Q5TAT6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC30.36■■■□□ 2.45
COL13A1Q5TAT6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.36■■■□□ 2.45
COL13A1Q5TAT6 MIR638-201ENST00000385237 100 ntBASIC30.35■■■□□ 2.45
COL13A1Q5TAT6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
COL13A1Q5TAT6 AC129492.7-201ENST00000622992 756 ntBASIC30.35■■■□□ 2.45
COL13A1Q5TAT6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
COL13A1Q5TAT6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
COL13A1Q5TAT6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC30.34■■■□□ 2.45
COL13A1Q5TAT6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
COL13A1Q5TAT6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.33■■■□□ 2.45
COL13A1Q5TAT6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
COL13A1Q5TAT6 AC060814.1-201ENST00000554326 538 ntBASIC30.33■■■□□ 2.45
COL13A1Q5TAT6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.33■■■□□ 2.45
COL13A1Q5TAT6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
COL13A1Q5TAT6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.32■■■□□ 2.44
COL13A1Q5TAT6 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
COL13A1Q5TAT6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.31■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms