Protein–RNA interactions for Protein: Q12428

PDH1, Probable 2-methylcitrate dehydratase, yeastyeast

Known RBP Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDH1Q12428 YJL160CYJL160C 864 nt8.5□□□□□ -1.05
PDH1Q12428 RIM2YBR192W 1134 nt8.5□□□□□ -1.05
PDH1Q12428 YOR325WYOR325W 474 nt8.49□□□□□ -1.05
PDH1Q12428 TOS1YBR162C 1368 nt8.48□□□□□ -1.05
PDH1Q12428 SFP1YLR403W 2052 nt8.48□□□□□ -1.05
PDH1Q12428 HOG1YLR113W 1308 nt8.47□□□□□ -1.05
PDH1Q12428 YMR210WYMR210W 1350 nt8.47□□□□□ -1.05
PDH1Q12428 GNP1YDR508C 1992 nt8.46□□□□□ -1.05
PDH1Q12428 YIL100C-AYIL100C-A 339 nt8.46□□□□□ -1.06
PDH1Q12428 ILV3YJR016C 1758 nt8.45□□□□□ -1.06
PDH1Q12428 REX2YLR059C 810 nt8.45□□□□□ -1.06
PDH1Q12428 MUP1YGR055W 1725 nt8.44□□□□□ -1.06
PDH1Q12428 HOL1YNR055C 1761 nt8.44□□□□□ -1.06
PDH1Q12428 SWT21YNL187W 1074 nt8.44□□□□□ -1.06
PDH1Q12428 KEL3YPL263C 1956 nt8.44□□□□□ -1.06
PDH1Q12428 YLR046CYLR046C 813 nt8.43□□□□□ -1.06
PDH1Q12428 YMR206WYMR206W 942 nt8.43□□□□□ -1.06
PDH1Q12428 KAE1YKR038C 1161 nt8.42□□□□□ -1.06
PDH1Q12428 GDH1YOR375C 1365 nt8.42□□□□□ -1.06
PDH1Q12428 tL(UAA)B1tL(UAA)B1 84 nt8.41□□□□□ -1.06
PDH1Q12428 tL(UAA)B2tL(UAA)B2 84 nt8.41□□□□□ -1.06
PDH1Q12428 tL(UAA)DtL(UAA)D 84 nt8.41□□□□□ -1.06
PDH1Q12428 SUP51tL(UAA)J 84 nt8.41□□□□□ -1.06
PDH1Q12428 tL(UAA)KtL(UAA)K 84 nt8.41□□□□□ -1.06
PDH1Q12428 tL(UAA)LtL(UAA)L 84 nt8.41□□□□□ -1.06
PDH1Q12428 tL(UAA)NtL(UAA)N 84 nt8.41□□□□□ -1.06
PDH1Q12428 ELO1YJL196C 933 nt8.41□□□□□ -1.06
PDH1Q12428 YJR154WYJR154W 1041 nt8.4□□□□□ -1.06
PDH1Q12428 YFR020WYFR020W 699 nt8.39□□□□□ -1.07
PDH1Q12428 SRP54YPR088C 1626 nt8.38□□□□□ -1.07
PDH1Q12428 CCT2YIL142W 1584 nt8.38□□□□□ -1.07
PDH1Q12428 GAL2YLR081W 1725 nt8.37□□□□□ -1.07
PDH1Q12428 SFL1YOR140W 2301 nt8.37□□□□□ -1.07
PDH1Q12428 OPI10YOL032W 741 nt8.37□□□□□ -1.07
PDH1Q12428 LSP1YPL004C 1026 nt8.37□□□□□ -1.07
PDH1Q12428 snR31snR31 225 nt8.37□□□□□ -1.07
PDH1Q12428 MET1YKR069W 1782 nt8.36□□□□□ -1.07
PDH1Q12428 YKL053WYKL053W 375 nt8.36□□□□□ -1.07
PDH1Q12428 ADA2YDR448W 1305 nt8.35□□□□□ -1.07
PDH1Q12428 YMR166CYMR166C 1107 nt8.34□□□□□ -1.07
PDH1Q12428 YPT11YNL304W 1254 nt8.34□□□□□ -1.07
PDH1Q12428 TAD2YJL035C 753 nt8.33□□□□□ -1.08
PDH1Q12428 MFT1YML062C 1179 nt8.33□□□□□ -1.08
PDH1Q12428 SDH8YBR269C 417 nt8.33□□□□□ -1.08
PDH1Q12428 RIM8YGL045W 1629 nt8.32□□□□□ -1.08
PDH1Q12428 BAP3YDR046C 1815 nt8.32□□□□□ -1.08
PDH1Q12428 PET18YCR020C 648 nt8.32□□□□□ -1.08
PDH1Q12428 PRE5YMR314W 705 nt8.32□□□□□ -1.08
PDH1Q12428 ARO8YGL202W 1503 nt8.32□□□□□ -1.08
PDH1Q12428 COQ8YGL119W 1506 nt8.31□□□□□ -1.08
PDH1Q12428 GTB1YDR221W 2109 nt8.31□□□□□ -1.08
PDH1Q12428 SUV3YPL029W 2214 nt8.31□□□□□ -1.08
PDH1Q12428 TOK1YJL093C 2076 nt8.3□□□□□ -1.08
PDH1Q12428 UTR5YEL035C 501 nt8.3□□□□□ -1.08
PDH1Q12428 ITR2YOL103W 1830 nt8.29□□□□□ -1.08
PDH1Q12428 RPN14YGL004C 1254 nt8.29□□□□□ -1.08
PDH1Q12428 HAP5YOR358W 729 nt8.29□□□□□ -1.08
PDH1Q12428 YMR265CYMR265C 1386 nt8.28□□□□□ -1.08
PDH1Q12428 RRT14YIL127C 621 nt8.28□□□□□ -1.08
PDH1Q12428 RSM7YJR113C 744 nt8.28□□□□□ -1.08
PDH1Q12428 CRC1YOR100C 984 nt8.28□□□□□ -1.08
PDH1Q12428 YPL247CYPL247C 1572 nt8.27□□□□□ -1.09
PDH1Q12428 SAN1YDR143C 1833 nt8.27□□□□□ -1.09
PDH1Q12428 YGL114WYGL114W 2178 nt8.27□□□□□ -1.09
PDH1Q12428 DLD3YEL071W 1491 nt8.26□□□□□ -1.09
PDH1Q12428 ELP4YPL101W 1371 nt8.26□□□□□ -1.09
PDH1Q12428 KES1YPL145C 1305 nt8.26□□□□□ -1.09
PDH1Q12428 YER156CYER156C 1017 nt8.25□□□□□ -1.09
PDH1Q12428 YJR149WYJR149W 1215 nt8.25□□□□□ -1.09
PDH1Q12428 UGP1YKL035W 1500 nt8.24□□□□□ -1.09
PDH1Q12428 SGA1YIL099W 1650 nt8.24□□□□□ -1.09
PDH1Q12428 FRA1YLL029W 2250 nt8.23□□□□□ -1.09
PDH1Q12428 CAK1YFL029C 1107 nt8.23□□□□□ -1.09
PDH1Q12428 ADE1YAR015W 921 nt8.23□□□□□ -1.09
PDH1Q12428 FUS3YBL016W 1062 nt8.23□□□□□ -1.09
PDH1Q12428 PET494YNR045W 1470 nt8.21□□□□□ -1.09
PDH1Q12428 HIS2YFR025C 1008 nt8.21□□□□□ -1.1
PDH1Q12428 YJL043WYJL043W 774 nt8.21□□□□□ -1.1
PDH1Q12428 YLR460CYLR460C 1131 nt8.21□□□□□ -1.1
PDH1Q12428 VMA11YPL234C 495 nt8.2□□□□□ -1.1
PDH1Q12428 PTC6YCR079W 1329 nt8.2□□□□□ -1.1
PDH1Q12428 GAS1YMR307W 1680 nt8.2□□□□□ -1.1
PDH1Q12428 KGD2YDR148C 1392 nt8.19□□□□□ -1.1
PDH1Q12428 YPR084WYPR084W 1371 nt8.19□□□□□ -1.1
PDH1Q12428 OCH1YGL038C 1443 nt8.19□□□□□ -1.1
PDH1Q12428 ZAP1YJL056C 2643 nt8.18□□□□□ -1.1
PDH1Q12428 HMG2YLR450W 3138 nt8.18□□□□□ -1.1
PDH1Q12428 TDH1YJL052W 999 nt8.17□□□□□ -1.1
PDH1Q12428 TPO4YOR273C 1980 nt8.17□□□□□ -1.1
PDH1Q12428 CHS7YHR142W 951 nt8.16□□□□□ -1.1
PDH1Q12428 GID8YMR135C 1368 nt8.16□□□□□ -1.1
PDH1Q12428 RPS6AYPL090C 711 nt8.16□□□□□ -1.1
PDH1Q12428 RPS6BYBR181C 711 nt8.16□□□□□ -1.1
PDH1Q12428 YHR219WYHR219W 1875 nt8.15□□□□□ -1.1
PDH1Q12428 NUP53YMR153W 1428 nt8.14□□□□□ -1.11
PDH1Q12428 YMR209CYMR209C 1374 nt8.14□□□□□ -1.11
PDH1Q12428 SBP1YHL034C 885 nt8.14□□□□□ -1.11
PDH1Q12428 BXI1YNL305C 894 nt8.14□□□□□ -1.11
PDH1Q12428 MET22YOL064C 1074 nt8.14□□□□□ -1.11
PDH1Q12428 SNX3YOR357C 489 nt8.14□□□□□ -1.11
Retrieved 100 of 7,029 protein–RNA pairs in 7.7 ms