Protein–RNA interactions for Protein: Q12342

LDB17, Protein LDB17, yeastyeast

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LDB17Q12342 REX2YLR059C 810 nt8.49□□□□□ -1.05
LDB17Q12342 SRP54YPR088C 1626 nt8.49□□□□□ -1.05
LDB17Q12342 LEU4YNL104C 1860 nt8.49□□□□□ -1.05
LDB17Q12342 GAL2YLR081W 1725 nt8.49□□□□□ -1.05
LDB17Q12342 NBA1YOL070C 1506 nt8.48□□□□□ -1.05
LDB17Q12342 NAP1YKR048C 1254 nt8.47□□□□□ -1.05
LDB17Q12342 INH1YDL181W 258 nt8.46□□□□□ -1.06
LDB17Q12342 tA(AGC)DtA(AGC)D 73 nt8.46□□□□□ -1.06
LDB17Q12342 tA(AGC)FtA(AGC)F 73 nt8.46□□□□□ -1.06
LDB17Q12342 tA(AGC)GtA(AGC)G 73 nt8.46□□□□□ -1.06
LDB17Q12342 tA(AGC)HtA(AGC)H 73 nt8.46□□□□□ -1.06
LDB17Q12342 tA(AGC)JtA(AGC)J 73 nt8.46□□□□□ -1.06
LDB17Q12342 tA(AGC)K1tA(AGC)K1 73 nt8.46□□□□□ -1.06
LDB17Q12342 tA(AGC)K2tA(AGC)K2 73 nt8.46□□□□□ -1.06
LDB17Q12342 tA(AGC)LtA(AGC)L 73 nt8.46□□□□□ -1.06
LDB17Q12342 tA(AGC)M1tA(AGC)M1 73 nt8.46□□□□□ -1.06
LDB17Q12342 tA(AGC)M2tA(AGC)M2 73 nt8.46□□□□□ -1.06
LDB17Q12342 tA(AGC)PtA(AGC)P 73 nt8.46□□□□□ -1.06
LDB17Q12342 ADH3YMR083W 1128 nt8.46□□□□□ -1.06
LDB17Q12342 PAU19YMR325W 375 nt8.46□□□□□ -1.06
LDB17Q12342 SDS24YBR214W 1584 nt8.46□□□□□ -1.06
LDB17Q12342 SBP1YHL034C 885 nt8.45□□□□□ -1.06
LDB17Q12342 YKR012CYKR012C 378 nt8.45□□□□□ -1.06
LDB17Q12342 YOR072WYOR072W 315 nt8.45□□□□□ -1.06
LDB17Q12342 IPL1YPL209C 1104 nt8.45□□□□□ -1.06
LDB17Q12342 FLX1YIL134W 936 nt8.44□□□□□ -1.06
LDB17Q12342 VBA3YCL069W 1377 nt8.44□□□□□ -1.06
LDB17Q12342 YMR316C-BYMR316C-B 309 nt8.43□□□□□ -1.06
LDB17Q12342 YRF1-3YGR296W 5580 nt8.43□□□□□ -1.06
LDB17Q12342 YRF1-6YNL339C 5580 nt8.43□□□□□ -1.06
LDB17Q12342 YRF1-7YPL283C 5580 nt8.43□□□□□ -1.06
LDB17Q12342 tE(CUC)DtE(CUC)D 72 nt8.42□□□□□ -1.06
LDB17Q12342 tE(CUC)ItE(CUC)I 72 nt8.42□□□□□ -1.06
LDB17Q12342 YPT11YNL304W 1254 nt8.42□□□□□ -1.06
LDB17Q12342 THI3YDL080C 1830 nt8.42□□□□□ -1.06
LDB17Q12342 GPM1YKL152C 744 nt8.41□□□□□ -1.06
LDB17Q12342 PUP1YOR157C 786 nt8.41□□□□□ -1.06
LDB17Q12342 GGA2YHR108W 1758 nt8.4□□□□□ -1.06
LDB17Q12342 YDR467CYDR467C 327 nt8.4□□□□□ -1.06
LDB17Q12342 GAS1YMR307W 1680 nt8.4□□□□□ -1.07
LDB17Q12342 NPP2YEL016C 1482 nt8.39□□□□□ -1.07
LDB17Q12342 FET5YFL041W 1869 nt8.39□□□□□ -1.07
LDB17Q12342 TOK1YJL093C 2076 nt8.39□□□□□ -1.07
LDB17Q12342 PTC6YCR079W 1329 nt8.37□□□□□ -1.07
LDB17Q12342 MOB1YIL106W 945 nt8.37□□□□□ -1.07
LDB17Q12342 MEX67YPL169C 1800 nt8.37□□□□□ -1.07
LDB17Q12342 ENO1YGR254W 1314 nt8.36□□□□□ -1.07
LDB17Q12342 LYS20YDL182W 1287 nt8.35□□□□□ -1.07
LDB17Q12342 YFR020WYFR020W 699 nt8.35□□□□□ -1.07
LDB17Q12342 CYC3YAL039C 810 nt8.35□□□□□ -1.07
LDB17Q12342 YBL095WYBL095W 813 nt8.34□□□□□ -1.07
LDB17Q12342 YCR025CYCR025C 411 nt8.33□□□□□ -1.08
LDB17Q12342 SRP102YKL154W 735 nt8.33□□□□□ -1.08
LDB17Q12342 tD(GUC)BtD(GUC)B 72 nt8.3□□□□□ -1.08
LDB17Q12342 tD(GUC)DtD(GUC)D 72 nt8.3□□□□□ -1.08
LDB17Q12342 tD(GUC)G1tD(GUC)G1 72 nt8.3□□□□□ -1.08
LDB17Q12342 tD(GUC)G2tD(GUC)G2 72 nt8.3□□□□□ -1.08
LDB17Q12342 tD(GUC)I1tD(GUC)I1 72 nt8.3□□□□□ -1.08
LDB17Q12342 tD(GUC)I2tD(GUC)I2 72 nt8.3□□□□□ -1.08
LDB17Q12342 tD(GUC)J1tD(GUC)J1 72 nt8.3□□□□□ -1.08
LDB17Q12342 tD(GUC)J2tD(GUC)J2 72 nt8.3□□□□□ -1.08
LDB17Q12342 tD(GUC)J3tD(GUC)J3 72 nt8.3□□□□□ -1.08
LDB17Q12342 tD(GUC)J4tD(GUC)J4 72 nt8.3□□□□□ -1.08
LDB17Q12342 tD(GUC)KtD(GUC)K 72 nt8.3□□□□□ -1.08
LDB17Q12342 tD(GUC)L1tD(GUC)L1 72 nt8.3□□□□□ -1.08
LDB17Q12342 tD(GUC)L2tD(GUC)L2 72 nt8.3□□□□□ -1.08
LDB17Q12342 tD(GUC)MtD(GUC)M 72 nt8.3□□□□□ -1.08
LDB17Q12342 tD(GUC)OtD(GUC)O 72 nt8.3□□□□□ -1.08
LDB17Q12342 AAC3YBR085W 924 nt8.3□□□□□ -1.08
LDB17Q12342 MDL2YPL270W 2322 nt8.29□□□□□ -1.08
LDB17Q12342 SER2YGR208W 930 nt8.29□□□□□ -1.08
LDB17Q12342 RSM7YJR113C 744 nt8.29□□□□□ -1.08
LDB17Q12342 YIL177CYIL177C 5277 nt8.28□□□□□ -1.08
LDB17Q12342 SLG1YOR008C 1137 nt8.28□□□□□ -1.08
LDB17Q12342 MTO1YGL236C 2010 nt8.27□□□□□ -1.09
LDB17Q12342 YLR280CYLR280C 351 nt8.27□□□□□ -1.09
LDB17Q12342 TMS1YDR105C 1422 nt8.27□□□□□ -1.09
LDB17Q12342 ERO1YML130C 1692 nt8.27□□□□□ -1.09
LDB17Q12342 TRP2YER090W 1524 nt8.26□□□□□ -1.09
LDB17Q12342 SWM1YDR260C 513 nt8.26□□□□□ -1.09
LDB17Q12342 MIM1YOL026C 342 nt8.26□□□□□ -1.09
LDB17Q12342 YMC2YBR104W 990 nt8.26□□□□□ -1.09
LDB17Q12342 HXT11YOL156W 1704 nt8.26□□□□□ -1.09
LDB17Q12342 THI6YPL214C 1623 nt8.25□□□□□ -1.09
LDB17Q12342 HTS1YPR033C 1641 nt8.25□□□□□ -1.09
LDB17Q12342 HBS1YKR084C 1836 nt8.24□□□□□ -1.09
LDB17Q12342 YCP4YCR004C 744 nt8.24□□□□□ -1.09
LDB17Q12342 MRS4YKR052C 915 nt8.24□□□□□ -1.09
LDB17Q12342 FRA1YLL029W 2250 nt8.23□□□□□ -1.09
LDB17Q12342 GNP1YDR508C 1992 nt8.22□□□□□ -1.09
LDB17Q12342 AAT1YKL106W 1356 nt8.22□□□□□ -1.09
LDB17Q12342 YDR306CYDR306C 1437 nt8.21□□□□□ -1.09
LDB17Q12342 YGR210CYGR210C 1236 nt8.21□□□□□ -1.1
LDB17Q12342 YIR035CYIR035C 765 nt8.21□□□□□ -1.1
LDB17Q12342 SAM50YNL026W 1455 nt8.2□□□□□ -1.1
LDB17Q12342 TPN1YGL186C 1740 nt8.2□□□□□ -1.1
LDB17Q12342 YLR072WYLR072W 2082 nt8.19□□□□□ -1.1
LDB17Q12342 SRM1YGL097W 1449 nt8.18□□□□□ -1.1
LDB17Q12342 DUR3YHL016C 2208 nt8.18□□□□□ -1.1
LDB17Q12342 YBR056WYBR056W 1506 nt8.18□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 9.3 ms