Protein–RNA interactions for Protein: Q07343

PDE4B, cAMP-specific 3',5'-cyclic phosphodiesterase 4B, humanhuman

Predictions only

Length 736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4BQ07343 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.83■■■□□ 2.53
PDE4BQ07343 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PDE4BQ07343 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
PDE4BQ07343 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
PDE4BQ07343 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.82■■■□□ 2.52
PDE4BQ07343 AC127502.1-201ENST00000399971 1502 ntBASIC30.82■■■□□ 2.52
PDE4BQ07343 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.81■■■□□ 2.52
PDE4BQ07343 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
PDE4BQ07343 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
PDE4BQ07343 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PDE4BQ07343 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
PDE4BQ07343 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.8■■■□□ 2.52
PDE4BQ07343 LINC01971-201ENST00000617888 1048 ntBASIC30.8■■■□□ 2.52
PDE4BQ07343 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
PDE4BQ07343 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PDE4BQ07343 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
PDE4BQ07343 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
PDE4BQ07343 LINC00273-201ENST00000539813 1452 ntBASIC30.76■■■□□ 2.51
PDE4BQ07343 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
PDE4BQ07343 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.75■■■□□ 2.51
PDE4BQ07343 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.74■■■□□ 2.51
PDE4BQ07343 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
PDE4BQ07343 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
PDE4BQ07343 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.73■■■□□ 2.51
PDE4BQ07343 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
PDE4BQ07343 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.72■■■□□ 2.51
PDE4BQ07343 DUX4L11-201ENST00000611504 1267 ntBASIC30.71■■■□□ 2.51
PDE4BQ07343 DUX4L12-201ENST00000614593 1267 ntBASIC30.71■■■□□ 2.51
PDE4BQ07343 DUX4L14-201ENST00000621227 1267 ntBASIC30.71■■■□□ 2.51
PDE4BQ07343 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PDE4BQ07343 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.7■■■□□ 2.5
PDE4BQ07343 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.7■■■□□ 2.5
PDE4BQ07343 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.7■■■□□ 2.5
PDE4BQ07343 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.7■■■□□ 2.5
PDE4BQ07343 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PDE4BQ07343 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PDE4BQ07343 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.68■■■□□ 2.5
PDE4BQ07343 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.67■■■□□ 2.5
PDE4BQ07343 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.67■■■□□ 2.5
PDE4BQ07343 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
PDE4BQ07343 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PDE4BQ07343 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
PDE4BQ07343 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PDE4BQ07343 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PDE4BQ07343 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.64■■■□□ 2.5
PDE4BQ07343 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.64■■■□□ 2.5
PDE4BQ07343 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.63■■■□□ 2.49
PDE4BQ07343 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
PDE4BQ07343 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
PDE4BQ07343 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PDE4BQ07343 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PDE4BQ07343 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.62■■■□□ 2.49
PDE4BQ07343 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.62■■■□□ 2.49
PDE4BQ07343 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.61■■■□□ 2.49
PDE4BQ07343 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.61■■■□□ 2.49
PDE4BQ07343 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.59■■■□□ 2.49
PDE4BQ07343 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PDE4BQ07343 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PDE4BQ07343 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.59■■■□□ 2.49
PDE4BQ07343 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
PDE4BQ07343 AC135983.2-203ENST00000454486 1613 ntBASIC30.58■■■□□ 2.49
PDE4BQ07343 HLA-V-202ENST00000446817 847 ntBASIC30.58■■■□□ 2.49
PDE4BQ07343 MIR3648-2-201ENST00000581792 180 ntBASIC30.58■■■□□ 2.49
PDE4BQ07343 MIR3648-1-201ENST00000615959 180 ntBASIC30.58■■■□□ 2.49
PDE4BQ07343 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.57■■■□□ 2.49
PDE4BQ07343 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
PDE4BQ07343 DUX4L13-201ENST00000554103 1267 ntBASIC30.57■■■□□ 2.48
PDE4BQ07343 DUX4L15-201ENST00000611059 1267 ntBASIC30.57■■■□□ 2.48
PDE4BQ07343 DUX4L23-201ENST00000615195 1269 ntBASIC30.57■■■□□ 2.48
PDE4BQ07343 DUX4L24-201ENST00000617576 1269 ntBASIC30.57■■■□□ 2.48
PDE4BQ07343 DUX4L22-201ENST00000618238 1269 ntBASIC30.57■■■□□ 2.48
PDE4BQ07343 DUX4L20-201ENST00000619712 1269 ntBASIC30.57■■■□□ 2.48
PDE4BQ07343 DUX4L21-201ENST00000622058 1269 ntBASIC30.57■■■□□ 2.48
PDE4BQ07343 DUX4L10-201ENST00000622460 1267 ntBASIC30.57■■■□□ 2.48
PDE4BQ07343 DUX4L25-201ENST00000624915 1269 ntBASIC30.57■■■□□ 2.48
PDE4BQ07343 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PDE4BQ07343 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PDE4BQ07343 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.56■■■□□ 2.48
PDE4BQ07343 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.56■■■□□ 2.48
PDE4BQ07343 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PDE4BQ07343 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PDE4BQ07343 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.55■■■□□ 2.48
PDE4BQ07343 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.55■■■□□ 2.48
PDE4BQ07343 ABCB10P1-201ENST00000614297 2181 ntBASIC30.55■■■□□ 2.48
PDE4BQ07343 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.54■■■□□ 2.48
PDE4BQ07343 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.54■■■□□ 2.48
PDE4BQ07343 CR559946.2-201ENST00000623684 991 ntBASIC30.54■■■□□ 2.48
PDE4BQ07343 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
PDE4BQ07343 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PDE4BQ07343 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
PDE4BQ07343 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
PDE4BQ07343 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PDE4BQ07343 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
PDE4BQ07343 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PDE4BQ07343 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.53■■■□□ 2.48
PDE4BQ07343 WHAMMP2-203ENST00000563942 1603 ntBASIC30.53■■■□□ 2.48
PDE4BQ07343 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
PDE4BQ07343 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
PDE4BQ07343 AC016575.1-201ENST00000607026 382 ntBASIC30.52■■■□□ 2.48
PDE4BQ07343 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms