Protein–RNA interactions for Protein: Q04235

TRM12, tRNA wybutosine-synthesizing protein 2, yeastyeast

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRM12Q04235 tA(AGC)PtA(AGC)P 73 nt8.26□□□□□ -1.09
TRM12Q04235 HMG2YLR450W 3138 nt8.26□□□□□ -1.09
TRM12Q04235 ALD5YER073W 1563 nt8.26□□□□□ -1.09
TRM12Q04235 HXK1YFR053C 1458 nt8.26□□□□□ -1.09
TRM12Q04235 FSH2YMR222C 672 nt8.25□□□□□ -1.09
TRM12Q04235 SLG1YOR008C 1137 nt8.25□□□□□ -1.09
TRM12Q04235 YKR012CYKR012C 378 nt8.24□□□□□ -1.09
TRM12Q04235 REX2YLR059C 810 nt8.24□□□□□ -1.09
TRM12Q04235 SRP54YPR088C 1626 nt8.23□□□□□ -1.09
TRM12Q04235 YDR467CYDR467C 327 nt8.23□□□□□ -1.09
TRM12Q04235 NPP2YEL016C 1482 nt8.22□□□□□ -1.09
TRM12Q04235 tE(CUC)DtE(CUC)D 72 nt8.22□□□□□ -1.09
TRM12Q04235 tE(CUC)ItE(CUC)I 72 nt8.22□□□□□ -1.09
TRM12Q04235 IPL1YPL209C 1104 nt8.22□□□□□ -1.09
TRM12Q04235 YOR072WYOR072W 315 nt8.21□□□□□ -1.1
TRM12Q04235 SDS24YBR214W 1584 nt8.2□□□□□ -1.1
TRM12Q04235 YCR025CYCR025C 411 nt8.2□□□□□ -1.1
TRM12Q04235 FLX1YIL134W 936 nt8.2□□□□□ -1.1
TRM12Q04235 FET5YFL041W 1869 nt8.19□□□□□ -1.1
TRM12Q04235 VBA3YCL069W 1377 nt8.19□□□□□ -1.1
TRM12Q04235 MOB1YIL106W 945 nt8.18□□□□□ -1.1
TRM12Q04235 THI3YDL080C 1830 nt8.15□□□□□ -1.1
TRM12Q04235 SBP1YHL034C 885 nt8.15□□□□□ -1.1
TRM12Q04235 tD(GUC)BtD(GUC)B 72 nt8.14□□□□□ -1.11
TRM12Q04235 tD(GUC)DtD(GUC)D 72 nt8.14□□□□□ -1.11
TRM12Q04235 tD(GUC)G1tD(GUC)G1 72 nt8.14□□□□□ -1.11
TRM12Q04235 tD(GUC)G2tD(GUC)G2 72 nt8.14□□□□□ -1.11
TRM12Q04235 tD(GUC)I1tD(GUC)I1 72 nt8.14□□□□□ -1.11
TRM12Q04235 tD(GUC)I2tD(GUC)I2 72 nt8.14□□□□□ -1.11
TRM12Q04235 tD(GUC)J1tD(GUC)J1 72 nt8.14□□□□□ -1.11
TRM12Q04235 tD(GUC)J2tD(GUC)J2 72 nt8.14□□□□□ -1.11
TRM12Q04235 tD(GUC)J3tD(GUC)J3 72 nt8.14□□□□□ -1.11
TRM12Q04235 tD(GUC)J4tD(GUC)J4 72 nt8.14□□□□□ -1.11
TRM12Q04235 tD(GUC)KtD(GUC)K 72 nt8.14□□□□□ -1.11
TRM12Q04235 tD(GUC)L1tD(GUC)L1 72 nt8.14□□□□□ -1.11
TRM12Q04235 tD(GUC)L2tD(GUC)L2 72 nt8.14□□□□□ -1.11
TRM12Q04235 tD(GUC)MtD(GUC)M 72 nt8.14□□□□□ -1.11
TRM12Q04235 tD(GUC)OtD(GUC)O 72 nt8.14□□□□□ -1.11
TRM12Q04235 GPM1YKL152C 744 nt8.14□□□□□ -1.11
TRM12Q04235 YMR316C-BYMR316C-B 309 nt8.13□□□□□ -1.11
TRM12Q04235 GAS1YMR307W 1680 nt8.12□□□□□ -1.11
TRM12Q04235 PTC6YCR079W 1329 nt8.12□□□□□ -1.11
TRM12Q04235 YCP4YCR004C 744 nt8.12□□□□□ -1.11
TRM12Q04235 YBL095WYBL095W 813 nt8.12□□□□□ -1.11
TRM12Q04235 MTO1YGL236C 2010 nt8.1□□□□□ -1.11
TRM12Q04235 LYS20YDL182W 1287 nt8.1□□□□□ -1.11
TRM12Q04235 CYC3YAL039C 810 nt8.1□□□□□ -1.11
TRM12Q04235 MIM1YOL026C 342 nt8.1□□□□□ -1.11
TRM12Q04235 SAM50YNL026W 1455 nt8.1□□□□□ -1.11
TRM12Q04235 MEX67YPL169C 1800 nt8.1□□□□□ -1.11
TRM12Q04235 GGA2YHR108W 1758 nt8.1□□□□□ -1.11
TRM12Q04235 BSP1YPR171W 1731 nt8.09□□□□□ -1.11
TRM12Q04235 TRP2YER090W 1524 nt8.09□□□□□ -1.11
TRM12Q04235 ENO1YGR254W 1314 nt8.09□□□□□ -1.11
TRM12Q04235 YPT11YNL304W 1254 nt8.09□□□□□ -1.11
TRM12Q04235 THI6YPL214C 1623 nt8.07□□□□□ -1.12
TRM12Q04235 HXT11YOL156W 1704 nt8.07□□□□□ -1.12
TRM12Q04235 YFR020WYFR020W 699 nt8.07□□□□□ -1.12
TRM12Q04235 HBS1YKR084C 1836 nt8.07□□□□□ -1.12
TRM12Q04235 NPP1YCR026C 2229 nt8.07□□□□□ -1.12
TRM12Q04235 SER2YGR208W 930 nt8.06□□□□□ -1.12
TRM12Q04235 YIA6YIL006W 1122 nt8.06□□□□□ -1.12
TRM12Q04235 YLR280CYLR280C 351 nt8.06□□□□□ -1.12
TRM12Q04235 YMC2YBR104W 990 nt8.06□□□□□ -1.12
TRM12Q04235 AAT1YKL106W 1356 nt8.06□□□□□ -1.12
TRM12Q04235 RIB1YBL033C 1038 nt8.05□□□□□ -1.12
TRM12Q04235 SWM1YDR260C 513 nt8.04□□□□□ -1.12
TRM12Q04235 SRP102YKL154W 735 nt8.04□□□□□ -1.12
TRM12Q04235 ERO1YML130C 1692 nt8.04□□□□□ -1.12
TRM12Q04235 TGA1tA(UGC)A 73 nt8.03□□□□□ -1.12
TRM12Q04235 tA(UGC)EtA(UGC)E 73 nt8.03□□□□□ -1.12
TRM12Q04235 tA(UGC)GtA(UGC)G 73 nt8.03□□□□□ -1.12
TRM12Q04235 tA(UGC)LtA(UGC)L 73 nt8.03□□□□□ -1.12
TRM12Q04235 tA(UGC)OtA(UGC)O 73 nt8.03□□□□□ -1.12
TRM12Q04235 SOD2YHR008C 702 nt8.02□□□□□ -1.13
TRM12Q04235 EMC3YKL207W 762 nt8.02□□□□□ -1.13
TRM12Q04235 HTS1YPR033C 1641 nt8.01□□□□□ -1.13
TRM12Q04235 DUR3YHL016C 2208 nt7.99□□□□□ -1.13
TRM12Q04235 SRM1YGL097W 1449 nt7.99□□□□□ -1.13
TRM12Q04235 YGR210CYGR210C 1236 nt7.99□□□□□ -1.13
TRM12Q04235 MRS4YKR052C 915 nt7.99□□□□□ -1.13
TRM12Q04235 ESBP6YNL125C 2022 nt7.99□□□□□ -1.13
TRM12Q04235 ORT1YOR130C 879 nt7.99□□□□□ -1.13
TRM12Q04235 RSM7YJR113C 744 nt7.98□□□□□ -1.13
TRM12Q04235 ERG6YML008C 1152 nt7.98□□□□□ -1.13
TRM12Q04235 YMR007WYMR007W 381 nt7.98□□□□□ -1.13
TRM12Q04235 AAC3YBR085W 924 nt7.98□□□□□ -1.13
TRM12Q04235 YLR072WYLR072W 2082 nt7.98□□□□□ -1.13
TRM12Q04235 URA8YJR103W 1737 nt7.98□□□□□ -1.13
TRM12Q04235 TPN1YGL186C 1740 nt7.95□□□□□ -1.14
TRM12Q04235 RCR1YBR005W 642 nt7.95□□□□□ -1.14
TRM12Q04235 YMR210WYMR210W 1350 nt7.95□□□□□ -1.14
TRM12Q04235 MDL2YPL270W 2322 nt7.95□□□□□ -1.14
TRM12Q04235 TMS1YDR105C 1422 nt7.95□□□□□ -1.14
TRM12Q04235 ILV2YMR108W 2064 nt7.94□□□□□ -1.14
TRM12Q04235 FCY1YPR062W 477 nt7.94□□□□□ -1.14
TRM12Q04235 RNA170RNA170 169 nt7.93□□□□□ -1.14
TRM12Q04235 YPL108WYPL108W 507 nt7.93□□□□□ -1.14
TRM12Q04235 snR86snR86 1004 nt7.92□□□□□ -1.14
TRM12Q04235 snR4snR4 186 nt7.92□□□□□ -1.14
Retrieved 100 of 7,029 protein–RNA pairs in 9.5 ms