Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 HAP5YOR358W 729 nt9.84□□□□□ -0.83
RPT4P53549 YMR265CYMR265C 1386 nt9.84□□□□□ -0.83
RPT4P53549 tL(UAA)B1tL(UAA)B1 84 nt9.83□□□□□ -0.84
RPT4P53549 tL(UAA)B2tL(UAA)B2 84 nt9.83□□□□□ -0.84
RPT4P53549 tL(UAA)DtL(UAA)D 84 nt9.83□□□□□ -0.84
RPT4P53549 SUP51tL(UAA)J 84 nt9.83□□□□□ -0.84
RPT4P53549 tL(UAA)KtL(UAA)K 84 nt9.83□□□□□ -0.84
RPT4P53549 tL(UAA)LtL(UAA)L 84 nt9.83□□□□□ -0.84
RPT4P53549 tL(UAA)NtL(UAA)N 84 nt9.83□□□□□ -0.84
RPT4P53549 SAN1YDR143C 1833 nt9.82□□□□□ -0.84
RPT4P53549 KAE1YKR038C 1161 nt9.82□□□□□ -0.84
RPT4P53549 snR31snR31 225 nt9.82□□□□□ -0.84
RPT4P53549 RIM2YBR192W 1134 nt9.81□□□□□ -0.84
RPT4P53549 LSP1YPL004C 1026 nt9.8□□□□□ -0.84
RPT4P53549 GDH1YOR375C 1365 nt9.78□□□□□ -0.84
RPT4P53549 ARO8YGL202W 1503 nt9.78□□□□□ -0.84
RPT4P53549 UTR5YEL035C 501 nt9.78□□□□□ -0.84
RPT4P53549 YMR166CYMR166C 1107 nt9.78□□□□□ -0.84
RPT4P53549 YPT11YNL304W 1254 nt9.78□□□□□ -0.84
RPT4P53549 ADA2YDR448W 1305 nt9.78□□□□□ -0.84
RPT4P53549 YHR219WYHR219W 1875 nt9.77□□□□□ -0.85
RPT4P53549 MCH5YOR306C 1566 nt9.76□□□□□ -0.85
RPT4P53549 YMR206WYMR206W 942 nt9.76□□□□□ -0.85
RPT4P53549 LSR1LSR1 1175 nt9.76□□□□□ -0.85
RPT4P53549 VMA11YPL234C 495 nt9.75□□□□□ -0.85
RPT4P53549 GID8YMR135C 1368 nt9.75□□□□□ -0.85
RPT4P53549 RPN14YGL004C 1254 nt9.74□□□□□ -0.85
RPT4P53549 KGD2YDR148C 1392 nt9.74□□□□□ -0.85
RPT4P53549 MUP1YGR055W 1725 nt9.73□□□□□ -0.85
RPT4P53549 SPT20YOL148C 1815 nt9.72□□□□□ -0.85
RPT4P53549 YJR149WYJR149W 1215 nt9.72□□□□□ -0.85
RPT4P53549 HOG1YLR113W 1308 nt9.71□□□□□ -0.86
RPT4P53549 MRS6YOR370C 1812 nt9.7□□□□□ -0.86
RPT4P53549 TAD2YJL035C 753 nt9.7□□□□□ -0.86
RPT4P53549 ELP4YPL101W 1371 nt9.7□□□□□ -0.86
RPT4P53549 PTC6YCR079W 1329 nt9.69□□□□□ -0.86
RPT4P53549 YER156CYER156C 1017 nt9.69□□□□□ -0.86
RPT4P53549 KES1YPL145C 1305 nt9.69□□□□□ -0.86
RPT4P53549 GAS1YMR307W 1680 nt9.68□□□□□ -0.86
RPT4P53549 RSM7YJR113C 744 nt9.68□□□□□ -0.86
RPT4P53549 MFT1YML062C 1179 nt9.68□□□□□ -0.86
RPT4P53549 SNX3YOR357C 489 nt9.68□□□□□ -0.86
RPT4P53549 YKL133CYKL133C 1392 nt9.67□□□□□ -0.86
RPT4P53549 CAK1YFL029C 1107 nt9.67□□□□□ -0.86
RPT4P53549 RRT14YIL127C 621 nt9.67□□□□□ -0.86
RPT4P53549 COQ8YGL119W 1506 nt9.66□□□□□ -0.86
RPT4P53549 TOS1YBR162C 1368 nt9.65□□□□□ -0.86
RPT4P53549 BAP3YDR046C 1815 nt9.63□□□□□ -0.87
RPT4P53549 ZAP1YJL056C 2643 nt9.63□□□□□ -0.87
RPT4P53549 SBP1YHL034C 885 nt9.63□□□□□ -0.87
RPT4P53549 ADE1YAR015W 921 nt9.63□□□□□ -0.87
RPT4P53549 SGA1YIL099W 1650 nt9.63□□□□□ -0.87
RPT4P53549 OCH1YGL038C 1443 nt9.63□□□□□ -0.87
RPT4P53549 HOL1YNR055C 1761 nt9.61□□□□□ -0.87
RPT4P53549 MET22YOL064C 1074 nt9.61□□□□□ -0.87
RPT4P53549 RPS6AYPL090C 711 nt9.61□□□□□ -0.87
RPT4P53549 RPS6BYBR181C 711 nt9.61□□□□□ -0.87
RPT4P53549 BXI1YNL305C 894 nt9.6□□□□□ -0.87
RPT4P53549 RPD3YNL330C 1302 nt9.59□□□□□ -0.87
RPT4P53549 YPL247CYPL247C 1572 nt9.59□□□□□ -0.87
RPT4P53549 PRE5YMR314W 705 nt9.58□□□□□ -0.88
RPT4P53549 YJL043WYJL043W 774 nt9.57□□□□□ -0.88
RPT4P53549 YLR460CYLR460C 1131 nt9.57□□□□□ -0.88
RPT4P53549 FUS3YBL016W 1062 nt9.57□□□□□ -0.88
RPT4P53549 SDH8YBR269C 417 nt9.55□□□□□ -0.88
RPT4P53549 PET494YNR045W 1470 nt9.54□□□□□ -0.88
RPT4P53549 CHS7YHR142W 951 nt9.54□□□□□ -0.88
RPT4P53549 RNA170RNA170 169 nt9.54□□□□□ -0.88
RPT4P53549 PDC6YGR087C 1692 nt9.53□□□□□ -0.88
RPT4P53549 ATP2YJR121W 1536 nt9.52□□□□□ -0.88
RPT4P53549 TDH1YJL052W 999 nt9.52□□□□□ -0.89
RPT4P53549 NUP53YMR153W 1428 nt9.52□□□□□ -0.89
RPT4P53549 YPR084WYPR084W 1371 nt9.51□□□□□ -0.89
RPT4P53549 CWP2YKL096W-A 279 nt9.49□□□□□ -0.89
RPT4P53549 YMR316C-BYMR316C-B 309 nt9.49□□□□□ -0.89
RPT4P53549 RPC31YNL151C 756 nt9.49□□□□□ -0.89
RPT4P53549 THI3YDL080C 1830 nt9.47□□□□□ -0.89
RPT4P53549 SSL2YIL143C 2532 nt9.47□□□□□ -0.89
RPT4P53549 UGP1YKL035W 1500 nt9.47□□□□□ -0.89
RPT4P53549 DPL1YDR294C 1770 nt9.46□□□□□ -0.9
RPT4P53549 KRR1YCL059C 951 nt9.45□□□□□ -0.9
RPT4P53549 OLA1YBR025C 1185 nt9.45□□□□□ -0.9
RPT4P53549 GGA2YHR108W 1758 nt9.45□□□□□ -0.9
RPT4P53549 CMP2YML057W 1815 nt9.45□□□□□ -0.9
RPT4P53549 YIL168WYIL168W 384 nt9.43□□□□□ -0.9
RPT4P53549 YPT31YER031C 672 nt9.4□□□□□ -0.9
RPT4P53549 FRE6YLL051C 2139 nt9.4□□□□□ -0.91
RPT4P53549 RHO1YPR165W 630 nt9.38□□□□□ -0.91
RPT4P53549 HIS2YFR025C 1008 nt9.37□□□□□ -0.91
RPT4P53549 RRT6YGL146C 936 nt9.37□□□□□ -0.91
RPT4P53549 RPR1RPR1 369 nt9.37□□□□□ -0.91
RPT4P53549 ODC1YPL134C 933 nt9.37□□□□□ -0.91
RPT4P53549 YIR035CYIR035C 765 nt9.36□□□□□ -0.91
RPT4P53549 GPM1YKL152C 744 nt9.36□□□□□ -0.91
RPT4P53549 SHC1YER096W 1539 nt9.35□□□□□ -0.91
RPT4P53549 YDR476CYDR476C 675 nt9.32□□□□□ -0.92
RPT4P53549 HAC1YFL031W 717 nt9.32□□□□□ -0.92
RPT4P53549 AAC3YBR085W 924 nt9.32□□□□□ -0.92
RPT4P53549 THI73YLR004C 1572 nt9.32□□□□□ -0.92
RPT4P53549 PSP2YML017W 1782 nt9.32□□□□□ -0.92
Retrieved 100 of 7,029 protein–RNA pairs in 55 ms