Protein–RNA interactions for Protein: P53179

RIM8, pH-response regulator protein palF/RIM8, yeastyeast

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM8P53179 tD(GUC)DtD(GUC)D 72 nt8.71□□□□□ -1.02
RIM8P53179 tD(GUC)G1tD(GUC)G1 72 nt8.71□□□□□ -1.02
RIM8P53179 tD(GUC)G2tD(GUC)G2 72 nt8.71□□□□□ -1.02
RIM8P53179 tD(GUC)I1tD(GUC)I1 72 nt8.71□□□□□ -1.02
RIM8P53179 tD(GUC)I2tD(GUC)I2 72 nt8.71□□□□□ -1.02
RIM8P53179 tD(GUC)J1tD(GUC)J1 72 nt8.71□□□□□ -1.02
RIM8P53179 tD(GUC)J2tD(GUC)J2 72 nt8.71□□□□□ -1.02
RIM8P53179 tD(GUC)J3tD(GUC)J3 72 nt8.71□□□□□ -1.02
RIM8P53179 tD(GUC)J4tD(GUC)J4 72 nt8.71□□□□□ -1.02
RIM8P53179 tD(GUC)KtD(GUC)K 72 nt8.71□□□□□ -1.02
RIM8P53179 tD(GUC)L1tD(GUC)L1 72 nt8.71□□□□□ -1.02
RIM8P53179 tD(GUC)L2tD(GUC)L2 72 nt8.71□□□□□ -1.02
RIM8P53179 tD(GUC)MtD(GUC)M 72 nt8.71□□□□□ -1.02
RIM8P53179 tD(GUC)OtD(GUC)O 72 nt8.71□□□□□ -1.02
RIM8P53179 ESS1YJR017C 513 nt8.71□□□□□ -1.02
RIM8P53179 HMG2YLR450W 3138 nt8.7□□□□□ -1.02
RIM8P53179 RPM1RPM1 483 nt8.7□□□□□ -1.02
RIM8P53179 PTC6YCR079W 1329 nt8.7□□□□□ -1.02
RIM8P53179 GAS1YMR307W 1680 nt8.69□□□□□ -1.02
RIM8P53179 THP3YPR045C 1413 nt8.69□□□□□ -1.02
RIM8P53179 HXK1YFR053C 1458 nt8.69□□□□□ -1.02
RIM8P53179 ARA2YMR041C 1008 nt8.68□□□□□ -1.02
RIM8P53179 PAU5YFL020C 369 nt8.67□□□□□ -1.02
RIM8P53179 SRM1YGL097W 1449 nt8.67□□□□□ -1.02
RIM8P53179 EMC3YKL207W 762 nt8.67□□□□□ -1.02
RIM8P53179 YOR072WYOR072W 315 nt8.67□□□□□ -1.02
RIM8P53179 Q0010Q0010 387 nt8.67□□□□□ -1.02
RIM8P53179 YEL009C-AYEL009C-A 408 nt8.66□□□□□ -1.02
RIM8P53179 PAU15YIR041W 375 nt8.66□□□□□ -1.02
RIM8P53179 YKR012CYKR012C 378 nt8.66□□□□□ -1.02
RIM8P53179 MRS4YKR052C 915 nt8.66□□□□□ -1.02
RIM8P53179 YLR072WYLR072W 2082 nt8.66□□□□□ -1.02
RIM8P53179 MIM1YOL026C 342 nt8.64□□□□□ -1.03
RIM8P53179 AAC3YBR085W 924 nt8.64□□□□□ -1.03
RIM8P53179 TPN1YGL186C 1740 nt8.63□□□□□ -1.03
RIM8P53179 PGC1YPL206C 966 nt8.63□□□□□ -1.03
RIM8P53179 MEX67YPL169C 1800 nt8.62□□□□□ -1.03
RIM8P53179 snR86snR86 1004 nt8.62□□□□□ -1.03
RIM8P53179 BMT5YIL096C 1011 nt8.62□□□□□ -1.03
RIM8P53179 ADH3YMR083W 1128 nt8.62□□□□□ -1.03
RIM8P53179 PHB2YGR231C 933 nt8.61□□□□□ -1.03
RIM8P53179 FSH2YMR222C 672 nt8.61□□□□□ -1.03
RIM8P53179 SDS24YBR214W 1584 nt8.61□□□□□ -1.03
RIM8P53179 VBA3YCL069W 1377 nt8.61□□□□□ -1.03
RIM8P53179 HBS1YKR084C 1836 nt8.6□□□□□ -1.03
RIM8P53179 IGD1YFR017C 588 nt8.59□□□□□ -1.03
RIM8P53179 YPT11YNL304W 1254 nt8.59□□□□□ -1.03
RIM8P53179 FTH1YBR207W 1398 nt8.59□□□□□ -1.03
RIM8P53179 TMS1YDR105C 1422 nt8.57□□□□□ -1.04
RIM8P53179 DUR3YHL016C 2208 nt8.57□□□□□ -1.04
RIM8P53179 YLR122CYLR122C 378 nt8.55□□□□□ -1.04
RIM8P53179 STP3YLR375W 1032 nt8.55□□□□□ -1.04
RIM8P53179 ABP1YCR088W 1779 nt8.55□□□□□ -1.04
RIM8P53179 MEP1YGR121C 1479 nt8.54□□□□□ -1.04
RIM8P53179 YMR210WYMR210W 1350 nt8.54□□□□□ -1.04
RIM8P53179 YJL009WYJL009W 327 nt8.54□□□□□ -1.04
RIM8P53179 ORT1YOR130C 879 nt8.54□□□□□ -1.04
RIM8P53179 MOB1YIL106W 945 nt8.53□□□□□ -1.04
RIM8P53179 YRF1-2YER190W 5046 nt8.53□□□□□ -1.04
RIM8P53179 PAR32YDL173W 888 nt8.52□□□□□ -1.05
RIM8P53179 tS(GCU)LtS(GCU)L 80 nt8.52□□□□□ -1.05
RIM8P53179 SRN2YLR119W 642 nt8.52□□□□□ -1.05
RIM8P53179 LEA1YPL213W 717 nt8.52□□□□□ -1.05
RIM8P53179 snR4snR4 186 nt8.52□□□□□ -1.05
RIM8P53179 YBR056WYBR056W 1506 nt8.51□□□□□ -1.05
RIM8P53179 YJR149WYJR149W 1215 nt8.51□□□□□ -1.05
RIM8P53179 YBR232CYBR232C 360 nt8.5□□□□□ -1.05
RIM8P53179 LYS20YDL182W 1287 nt8.49□□□□□ -1.05
RIM8P53179 FLX1YIL134W 936 nt8.49□□□□□ -1.05
RIM8P53179 RSM7YJR113C 744 nt8.49□□□□□ -1.05
RIM8P53179 FRE6YLL051C 2139 nt8.49□□□□□ -1.05
RIM8P53179 tA(AGC)DtA(AGC)D 73 nt8.48□□□□□ -1.05
RIM8P53179 tA(AGC)FtA(AGC)F 73 nt8.48□□□□□ -1.05
RIM8P53179 tA(AGC)GtA(AGC)G 73 nt8.48□□□□□ -1.05
RIM8P53179 tA(AGC)HtA(AGC)H 73 nt8.48□□□□□ -1.05
RIM8P53179 tA(AGC)JtA(AGC)J 73 nt8.48□□□□□ -1.05
RIM8P53179 tA(AGC)K1tA(AGC)K1 73 nt8.48□□□□□ -1.05
RIM8P53179 tA(AGC)K2tA(AGC)K2 73 nt8.48□□□□□ -1.05
RIM8P53179 tA(AGC)LtA(AGC)L 73 nt8.48□□□□□ -1.05
RIM8P53179 tA(AGC)M1tA(AGC)M1 73 nt8.48□□□□□ -1.05
RIM8P53179 tA(AGC)M2tA(AGC)M2 73 nt8.48□□□□□ -1.05
RIM8P53179 tA(AGC)PtA(AGC)P 73 nt8.48□□□□□ -1.05
RIM8P53179 YFR020WYFR020W 699 nt8.48□□□□□ -1.05
RIM8P53179 YIR018C-AYIR018C-A 138 nt8.48□□□□□ -1.05
RIM8P53179 ENO1YGR254W 1314 nt8.48□□□□□ -1.05
RIM8P53179 HIS3YOR202W 663 nt8.47□□□□□ -1.05
RIM8P53179 DUS3YLR401C 2007 nt8.46□□□□□ -1.06
RIM8P53179 MDL2YPL270W 2322 nt8.45□□□□□ -1.06
RIM8P53179 BUB2YMR055C 921 nt8.45□□□□□ -1.06
RIM8P53179 IPL1YPL209C 1104 nt8.44□□□□□ -1.06
RIM8P53179 NPP1YCR026C 2229 nt8.42□□□□□ -1.06
RIM8P53179 YIR035CYIR035C 765 nt8.42□□□□□ -1.06
RIM8P53179 YDR509WYDR509W 348 nt8.41□□□□□ -1.06
RIM8P53179 INO1YJL153C 1602 nt8.4□□□□□ -1.06
RIM8P53179 YLR280CYLR280C 351 nt8.4□□□□□ -1.06
RIM8P53179 RNA170RNA170 169 nt8.39□□□□□ -1.07
RIM8P53179 URA8YJR103W 1737 nt8.39□□□□□ -1.07
RIM8P53179 Q0144Q0144 330 nt8.37□□□□□ -1.07
RIM8P53179 CYC3YAL039C 810 nt8.37□□□□□ -1.07
RIM8P53179 ERO1YML130C 1692 nt8.37□□□□□ -1.07
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms