Protein–RNA interactions for Protein: P38915

SPT8, Transcription factor SPT8, yeastyeast

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT8P38915 tD(GUC)I1tD(GUC)I1 72 nt9.16□□□□□ -0.94
SPT8P38915 tD(GUC)I2tD(GUC)I2 72 nt9.16□□□□□ -0.94
SPT8P38915 tD(GUC)J1tD(GUC)J1 72 nt9.16□□□□□ -0.94
SPT8P38915 tD(GUC)J2tD(GUC)J2 72 nt9.16□□□□□ -0.94
SPT8P38915 tD(GUC)J3tD(GUC)J3 72 nt9.16□□□□□ -0.94
SPT8P38915 tD(GUC)J4tD(GUC)J4 72 nt9.16□□□□□ -0.94
SPT8P38915 tD(GUC)KtD(GUC)K 72 nt9.16□□□□□ -0.94
SPT8P38915 tD(GUC)L1tD(GUC)L1 72 nt9.16□□□□□ -0.94
SPT8P38915 tD(GUC)L2tD(GUC)L2 72 nt9.16□□□□□ -0.94
SPT8P38915 tD(GUC)MtD(GUC)M 72 nt9.16□□□□□ -0.94
SPT8P38915 tD(GUC)OtD(GUC)O 72 nt9.16□□□□□ -0.94
SPT8P38915 SRP54YPR088C 1626 nt9.16□□□□□ -0.94
SPT8P38915 FSH2YMR222C 672 nt9.15□□□□□ -0.94
SPT8P38915 YBL095WYBL095W 813 nt9.15□□□□□ -0.94
SPT8P38915 MIM1YOL026C 342 nt9.15□□□□□ -0.94
SPT8P38915 YRF1-3YGR296W 5580 nt9.15□□□□□ -0.94
SPT8P38915 YRF1-6YNL339C 5580 nt9.15□□□□□ -0.94
SPT8P38915 YRF1-7YPL283C 5580 nt9.15□□□□□ -0.94
SPT8P38915 MDL2YPL270W 2322 nt9.15□□□□□ -0.95
SPT8P38915 REX2YLR059C 810 nt9.13□□□□□ -0.95
SPT8P38915 PGC1YPL206C 966 nt9.12□□□□□ -0.95
SPT8P38915 MAS1YLR163C 1389 nt9.12□□□□□ -0.95
SPT8P38915 tS(GCU)LtS(GCU)L 80 nt9.11□□□□□ -0.95
SPT8P38915 SPE2YOL052C 1191 nt9.11□□□□□ -0.95
SPT8P38915 HBS1YKR084C 1836 nt9.1□□□□□ -0.95
SPT8P38915 PAU5YFL020C 369 nt9.09□□□□□ -0.95
SPT8P38915 STP3YLR375W 1032 nt9.09□□□□□ -0.95
SPT8P38915 GAS1YMR307W 1680 nt9.09□□□□□ -0.95
SPT8P38915 MTO1YGL236C 2010 nt9.08□□□□□ -0.96
SPT8P38915 YPT11YNL304W 1254 nt9.07□□□□□ -0.96
SPT8P38915 AAC3YBR085W 924 nt9.07□□□□□ -0.96
SPT8P38915 PTC6YCR079W 1329 nt9.06□□□□□ -0.96
SPT8P38915 PAR32YDL173W 888 nt9.06□□□□□ -0.96
SPT8P38915 KRE1YNL322C 942 nt9.06□□□□□ -0.96
SPT8P38915 YLR072WYLR072W 2082 nt9.05□□□□□ -0.96
SPT8P38915 YBR232CYBR232C 360 nt9.05□□□□□ -0.96
SPT8P38915 GAL2YLR081W 1725 nt9.05□□□□□ -0.96
SPT8P38915 HXT11YOL156W 1704 nt9.05□□□□□ -0.96
SPT8P38915 MCM5YLR274W 2328 nt9.04□□□□□ -0.96
SPT8P38915 SDS24YBR214W 1584 nt9.04□□□□□ -0.96
SPT8P38915 AAT1YKL106W 1356 nt9.04□□□□□ -0.96
SPT8P38915 YDR510C-AYDR510C-A 117 nt9.04□□□□□ -0.96
SPT8P38915 IGD1YFR017C 588 nt9.04□□□□□ -0.96
SPT8P38915 ESS1YJR017C 513 nt9.04□□□□□ -0.96
SPT8P38915 YMC2YBR104W 990 nt9.04□□□□□ -0.96
SPT8P38915 TRP2YER090W 1524 nt9.04□□□□□ -0.96
SPT8P38915 VBA3YCL069W 1377 nt9.03□□□□□ -0.96
SPT8P38915 THI6YPL214C 1623 nt9.03□□□□□ -0.96
SPT8P38915 PHB2YGR231C 933 nt9.03□□□□□ -0.96
SPT8P38915 YIL177CYIL177C 5277 nt9.02□□□□□ -0.97
SPT8P38915 YKR012CYKR012C 378 nt9.02□□□□□ -0.97
SPT8P38915 DUR3YHL016C 2208 nt9.02□□□□□ -0.97
SPT8P38915 MRS4YKR052C 915 nt9.01□□□□□ -0.97
SPT8P38915 TMS1YDR105C 1422 nt9□□□□□ -0.97
SPT8P38915 ADH3YMR083W 1128 nt9□□□□□ -0.97
SPT8P38915 TPN1YGL186C 1740 nt8.98□□□□□ -0.97
SPT8P38915 FIT1YDR534C 1587 nt8.98□□□□□ -0.97
SPT8P38915 UFD1YGR048W 1086 nt8.97□□□□□ -0.97
SPT8P38915 EMC3YKL207W 762 nt8.97□□□□□ -0.97
SPT8P38915 ORT1YOR130C 879 nt8.97□□□□□ -0.97
SPT8P38915 LYS20YDL182W 1287 nt8.96□□□□□ -0.98
SPT8P38915 RFC1YOR217W 2586 nt8.95□□□□□ -0.98
SPT8P38915 snR86snR86 1004 nt8.95□□□□□ -0.98
SPT8P38915 YFR020WYFR020W 699 nt8.95□□□□□ -0.98
SPT8P38915 SRM1YGL097W 1449 nt8.95□□□□□ -0.98
SPT8P38915 FLX1YIL134W 936 nt8.94□□□□□ -0.98
SPT8P38915 tA(AGC)DtA(AGC)D 73 nt8.93□□□□□ -0.98
SPT8P38915 tA(AGC)FtA(AGC)F 73 nt8.93□□□□□ -0.98
SPT8P38915 tA(AGC)GtA(AGC)G 73 nt8.93□□□□□ -0.98
SPT8P38915 tA(AGC)HtA(AGC)H 73 nt8.93□□□□□ -0.98
SPT8P38915 tA(AGC)JtA(AGC)J 73 nt8.93□□□□□ -0.98
SPT8P38915 tA(AGC)K1tA(AGC)K1 73 nt8.93□□□□□ -0.98
SPT8P38915 tA(AGC)K2tA(AGC)K2 73 nt8.93□□□□□ -0.98
SPT8P38915 tA(AGC)LtA(AGC)L 73 nt8.93□□□□□ -0.98
SPT8P38915 tA(AGC)M1tA(AGC)M1 73 nt8.93□□□□□ -0.98
SPT8P38915 tA(AGC)M2tA(AGC)M2 73 nt8.93□□□□□ -0.98
SPT8P38915 tA(AGC)PtA(AGC)P 73 nt8.93□□□□□ -0.98
SPT8P38915 GTB1YDR221W 2109 nt8.93□□□□□ -0.98
SPT8P38915 DUS3YLR401C 2007 nt8.92□□□□□ -0.98
SPT8P38915 SEN2YLR105C 1134 nt8.92□□□□□ -0.98
SPT8P38915 YBR056WYBR056W 1506 nt8.91□□□□□ -0.98
SPT8P38915 YMR210WYMR210W 1350 nt8.91□□□□□ -0.98
SPT8P38915 ENO1YGR254W 1314 nt8.91□□□□□ -0.98
SPT8P38915 RSM7YJR113C 744 nt8.9□□□□□ -0.98
SPT8P38915 IPL1YPL209C 1104 nt8.9□□□□□ -0.98
SPT8P38915 snR4snR4 186 nt8.9□□□□□ -0.98
SPT8P38915 MOB1YIL106W 945 nt8.89□□□□□ -0.99
SPT8P38915 YIR035CYIR035C 765 nt8.89□□□□□ -0.99
SPT8P38915 POP2YNR052C 1302 nt8.88□□□□□ -0.99
SPT8P38915 LEA1YPL213W 717 nt8.87□□□□□ -0.99
SPT8P38915 ADE16YLR028C 1776 nt8.86□□□□□ -0.99
SPT8P38915 ABP1YCR088W 1779 nt8.86□□□□□ -0.99
SPT8P38915 SRP102YKL154W 735 nt8.85□□□□□ -0.99
SPT8P38915 BUB2YMR055C 921 nt8.85□□□□□ -0.99
SPT8P38915 YJL009WYJL009W 327 nt8.84□□□□□ -0.99
SPT8P38915 CYC3YAL039C 810 nt8.84□□□□□ -0.99
SPT8P38915 YJR149WYJR149W 1215 nt8.83□□□□□ -1
SPT8P38915 HIS3YOR202W 663 nt8.83□□□□□ -1
SPT8P38915 LPD1YFL018C 1500 nt8.83□□□□□ -1
SPT8P38915 FTH1YBR207W 1398 nt8.82□□□□□ -1
Retrieved 100 of 7,029 protein–RNA pairs in 7.1 ms