Protein–RNA interactions for Protein: P38712

RRP3, ATP-dependent rRNA helicase RRP3, yeastyeast

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP3P38712 YHL008CYHL008C 1884 nt8.15□□□□□ -1.1
RRP3P38712 HRA1HRA1 564 nt8.15□□□□□ -1.1
RRP3P38712 ELO1YJL196C 933 nt8.15□□□□□ -1.1
RRP3P38712 REX2YLR059C 810 nt8.15□□□□□ -1.1
RRP3P38712 SFL1YOR140W 2301 nt8.14□□□□□ -1.11
RRP3P38712 NME1NME1 340 nt8.13□□□□□ -1.11
RRP3P38712 TGA1tA(UGC)A 73 nt8.12□□□□□ -1.11
RRP3P38712 tA(UGC)EtA(UGC)E 73 nt8.12□□□□□ -1.11
RRP3P38712 tA(UGC)GtA(UGC)G 73 nt8.12□□□□□ -1.11
RRP3P38712 tA(UGC)LtA(UGC)L 73 nt8.12□□□□□ -1.11
RRP3P38712 tA(UGC)OtA(UGC)O 73 nt8.12□□□□□ -1.11
RRP3P38712 YAL016C-AYAL016C-A 315 nt8.12□□□□□ -1.11
RRP3P38712 YPL108WYPL108W 507 nt8.12□□□□□ -1.11
RRP3P38712 DLD3YEL071W 1491 nt8.12□□□□□ -1.11
RRP3P38712 SUV3YPL029W 2214 nt8.11□□□□□ -1.11
RRP3P38712 ALD5YER073W 1563 nt8.11□□□□□ -1.11
RRP3P38712 GRH1YDR517W 1119 nt8.11□□□□□ -1.11
RRP3P38712 RPN14YGL004C 1254 nt8.11□□□□□ -1.11
RRP3P38712 FCY1YPR062W 477 nt8.11□□□□□ -1.11
RRP3P38712 MET1YKR069W 1782 nt8.11□□□□□ -1.11
RRP3P38712 YMR265CYMR265C 1386 nt8.1□□□□□ -1.11
RRP3P38712 YPT11YNL304W 1254 nt8.1□□□□□ -1.11
RRP3P38712 HAP5YOR358W 729 nt8.1□□□□□ -1.11
RRP3P38712 RIM2YBR192W 1134 nt8.1□□□□□ -1.11
RRP3P38712 SRP54YPR088C 1626 nt8.1□□□□□ -1.11
RRP3P38712 ITR2YOL103W 1830 nt8.1□□□□□ -1.11
RRP3P38712 RSC4YKR008W 1878 nt8.09□□□□□ -1.12
RRP3P38712 YFR020WYFR020W 699 nt8.08□□□□□ -1.12
RRP3P38712 ARO8YGL202W 1503 nt8.08□□□□□ -1.12
RRP3P38712 YJL160CYJL160C 864 nt8.07□□□□□ -1.12
RRP3P38712 VMA11YPL234C 495 nt8.07□□□□□ -1.12
RRP3P38712 COQ8YGL119W 1506 nt8.07□□□□□ -1.12
RRP3P38712 YKL053WYKL053W 375 nt8.06□□□□□ -1.12
RRP3P38712 EMC3YKL207W 762 nt8.06□□□□□ -1.12
RRP3P38712 MRP1YDR347W 966 nt8.05□□□□□ -1.12
RRP3P38712 YRF1-2YER190W 5046 nt8.04□□□□□ -1.12
RRP3P38712 CRC1YOR100C 984 nt8.04□□□□□ -1.12
RRP3P38712 FRA1YLL029W 2250 nt8.04□□□□□ -1.12
RRP3P38712 KES1YPL145C 1305 nt8.03□□□□□ -1.12
RRP3P38712 SAN1YDR143C 1833 nt8.03□□□□□ -1.12
RRP3P38712 YOR268CYOR268C 399 nt8.03□□□□□ -1.12
RRP3P38712 UGP1YKL035W 1500 nt8.03□□□□□ -1.12
RRP3P38712 YMR210WYMR210W 1350 nt8.01□□□□□ -1.13
RRP3P38712 YMR166CYMR166C 1107 nt8.01□□□□□ -1.13
RRP3P38712 NSG2YNL156C 900 nt8.01□□□□□ -1.13
RRP3P38712 SGA1YIL099W 1650 nt8.01□□□□□ -1.13
RRP3P38712 TOM71YHR117W 1920 nt8.01□□□□□ -1.13
RRP3P38712 GID8YMR135C 1368 nt8□□□□□ -1.13
RRP3P38712 RSM7YJR113C 744 nt8□□□□□ -1.13
RRP3P38712 TPN1YGL186C 1740 nt8□□□□□ -1.13
RRP3P38712 YHR219WYHR219W 1875 nt8□□□□□ -1.13
RRP3P38712 MTO1YGL236C 2010 nt8□□□□□ -1.13
RRP3P38712 HIS2YFR025C 1008 nt7.99□□□□□ -1.13
RRP3P38712 SNX3YOR357C 489 nt7.99□□□□□ -1.13
RRP3P38712 YMR209CYMR209C 1374 nt7.98□□□□□ -1.13
RRP3P38712 ZAP1YJL056C 2643 nt7.98□□□□□ -1.13
RRP3P38712 EDC2YER035W 438 nt7.98□□□□□ -1.13
RRP3P38712 GDH1YOR375C 1365 nt7.97□□□□□ -1.13
RRP3P38712 YRF1-3YGR296W 5580 nt7.97□□□□□ -1.13
RRP3P38712 YRF1-6YNL339C 5580 nt7.97□□□□□ -1.13
RRP3P38712 YRF1-7YPL283C 5580 nt7.97□□□□□ -1.13
RRP3P38712 KRR1YCL059C 951 nt7.97□□□□□ -1.13
RRP3P38712 LSP1YPL004C 1026 nt7.97□□□□□ -1.13
RRP3P38712 RPD3YNL330C 1302 nt7.96□□□□□ -1.14
RRP3P38712 GAS1YMR307W 1680 nt7.95□□□□□ -1.14
RRP3P38712 RRT14YIL127C 621 nt7.95□□□□□ -1.14
RRP3P38712 LSR1LSR1 1175 nt7.95□□□□□ -1.14
RRP3P38712 KGD2YDR148C 1392 nt7.95□□□□□ -1.14
RRP3P38712 YKL133CYKL133C 1392 nt7.95□□□□□ -1.14
RRP3P38712 SBP1YHL034C 885 nt7.94□□□□□ -1.14
RRP3P38712 MFT1YML062C 1179 nt7.94□□□□□ -1.14
RRP3P38712 PTC6YCR079W 1329 nt7.94□□□□□ -1.14
RRP3P38712 YLR460CYLR460C 1131 nt7.93□□□□□ -1.14
RRP3P38712 MRS6YOR370C 1812 nt7.93□□□□□ -1.14
RRP3P38712 ADA2YDR448W 1305 nt7.93□□□□□ -1.14
RRP3P38712 MFG1YDL233W 1377 nt7.93□□□□□ -1.14
RRP3P38712 YER156CYER156C 1017 nt7.92□□□□□ -1.14
RRP3P38712 TAD2YJL035C 753 nt7.91□□□□□ -1.14
RRP3P38712 CWP2YKL096W-A 279 nt7.91□□□□□ -1.14
RRP3P38712 PET18YCR020C 648 nt7.9□□□□□ -1.14
RRP3P38712 tL(UAA)B1tL(UAA)B1 84 nt7.9□□□□□ -1.14
RRP3P38712 tL(UAA)B2tL(UAA)B2 84 nt7.9□□□□□ -1.14
RRP3P38712 tL(UAA)DtL(UAA)D 84 nt7.9□□□□□ -1.14
RRP3P38712 SUP51tL(UAA)J 84 nt7.9□□□□□ -1.14
RRP3P38712 tL(UAA)KtL(UAA)K 84 nt7.9□□□□□ -1.14
RRP3P38712 tL(UAA)LtL(UAA)L 84 nt7.9□□□□□ -1.14
RRP3P38712 tL(UAA)NtL(UAA)N 84 nt7.9□□□□□ -1.14
RRP3P38712 CAK1YFL029C 1107 nt7.89□□□□□ -1.15
RRP3P38712 CHS7YHR142W 951 nt7.88□□□□□ -1.15
RRP3P38712 OCH1YGL038C 1443 nt7.87□□□□□ -1.15
RRP3P38712 MET22YOL064C 1074 nt7.86□□□□□ -1.15
RRP3P38712 CYT1YOR065W 930 nt7.86□□□□□ -1.15
RRP3P38712 YOR072WYOR072W 315 nt7.86□□□□□ -1.15
RRP3P38712 PSD1YNL169C 1503 nt7.86□□□□□ -1.15
RRP3P38712 YPR084WYPR084W 1371 nt7.84□□□□□ -1.15
RRP3P38712 SSL2YIL143C 2532 nt7.84□□□□□ -1.15
RRP3P38712 UTR5YEL035C 501 nt7.84□□□□□ -1.15
RRP3P38712 RPC31YNL151C 756 nt7.84□□□□□ -1.15
RRP3P38712 ELP4YPL101W 1371 nt7.84□□□□□ -1.16
RRP3P38712 YLR173WYLR173W 1827 nt7.83□□□□□ -1.16
Retrieved 100 of 7,029 protein–RNA pairs in 35.6 ms