Protein–RNA interactions for Protein: P09007

SRD1, Pre-rRNA-processing protein SRD1, yeastyeast

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRD1P09007 SOD2YHR008C 702 nt9.19□□□□□ -0.94
SRD1P09007 MAS1YLR163C 1389 nt9.19□□□□□ -0.94
SRD1P09007 SAN1YDR143C 1833 nt9.18□□□□□ -0.94
SRD1P09007 HTS1YPR033C 1641 nt9.17□□□□□ -0.94
SRD1P09007 SRP102YKL154W 735 nt9.17□□□□□ -0.94
SRD1P09007 ERG6YML008C 1152 nt9.17□□□□□ -0.94
SRD1P09007 RIM2YBR192W 1134 nt9.17□□□□□ -0.94
SRD1P09007 CWP2YKL096W-A 279 nt9.16□□□□□ -0.94
SRD1P09007 SSL2YIL143C 2532 nt9.15□□□□□ -0.94
SRD1P09007 KGD2YDR148C 1392 nt9.15□□□□□ -0.94
SRD1P09007 YLR280CYLR280C 351 nt9.15□□□□□ -0.94
SRD1P09007 ERO1YML130C 1692 nt9.14□□□□□ -0.95
SRD1P09007 TGA1tA(UGC)A 73 nt9.13□□□□□ -0.95
SRD1P09007 tA(UGC)EtA(UGC)E 73 nt9.13□□□□□ -0.95
SRD1P09007 tA(UGC)GtA(UGC)G 73 nt9.13□□□□□ -0.95
SRD1P09007 tA(UGC)LtA(UGC)L 73 nt9.13□□□□□ -0.95
SRD1P09007 tA(UGC)OtA(UGC)O 73 nt9.13□□□□□ -0.95
SRD1P09007 YPT11YNL304W 1254 nt9.13□□□□□ -0.95
SRD1P09007 YMR007WYMR007W 381 nt9.12□□□□□ -0.95
SRD1P09007 RPC31YNL151C 756 nt9.12□□□□□ -0.95
SRD1P09007 ODC1YPL134C 933 nt9.12□□□□□ -0.95
SRD1P09007 KRR1YCL059C 951 nt9.11□□□□□ -0.95
SRD1P09007 YGR210CYGR210C 1236 nt9.11□□□□□ -0.95
SRD1P09007 HSL7YBR133C 2484 nt9.09□□□□□ -0.95
SRD1P09007 YFR020WYFR020W 699 nt9.08□□□□□ -0.96
SRD1P09007 SBP1YHL034C 885 nt9.08□□□□□ -0.96
SRD1P09007 FCY1YPR062W 477 nt9.08□□□□□ -0.96
SRD1P09007 PTC6YCR079W 1329 nt9.07□□□□□ -0.96
SRD1P09007 GAS1YMR307W 1680 nt9.07□□□□□ -0.96
SRD1P09007 RCR1YBR005W 642 nt9.07□□□□□ -0.96
SRD1P09007 MCM5YLR274W 2328 nt9.05□□□□□ -0.96
SRD1P09007 RIM8YGL045W 1629 nt9.05□□□□□ -0.96
SRD1P09007 DPL1YDR294C 1770 nt9.04□□□□□ -0.96
SRD1P09007 RSM7YJR113C 744 nt9.04□□□□□ -0.96
SRD1P09007 POP2YNR052C 1302 nt9.04□□□□□ -0.96
SRD1P09007 YPL108WYPL108W 507 nt9.03□□□□□ -0.96
SRD1P09007 GID7YCL039W 2238 nt9.03□□□□□ -0.96
SRD1P09007 YGL114WYGL114W 2178 nt9.02□□□□□ -0.97
SRD1P09007 MDM35YKL053C-A 261 nt9.01□□□□□ -0.97
SRD1P09007 YER152W-AYER152W-A 567 nt9□□□□□ -0.97
SRD1P09007 GGA2YHR108W 1758 nt8.98□□□□□ -0.97
SRD1P09007 YMR209CYMR209C 1374 nt8.98□□□□□ -0.97
SRD1P09007 YDR306CYDR306C 1437 nt8.97□□□□□ -0.97
SRD1P09007 THI3YDL080C 1830 nt8.96□□□□□ -0.97
SRD1P09007 YJL160CYJL160C 864 nt8.96□□□□□ -0.98
SRD1P09007 YMR166CYMR166C 1107 nt8.96□□□□□ -0.98
SRD1P09007 YMR316C-BYMR316C-B 309 nt8.96□□□□□ -0.98
SRD1P09007 GPM1YKL152C 744 nt8.95□□□□□ -0.98
SRD1P09007 LSP1YPL004C 1026 nt8.95□□□□□ -0.98
SRD1P09007 PUS7YOR243C 2031 nt8.94□□□□□ -0.98
SRD1P09007 YDR467CYDR467C 327 nt8.94□□□□□ -0.98
SRD1P09007 LEU4YNL104C 1860 nt8.94□□□□□ -0.98
SRD1P09007 YLR460CYLR460C 1131 nt8.93□□□□□ -0.98
SRD1P09007 DMA2YNL116W 1569 nt8.93□□□□□ -0.98
SRD1P09007 ESBP6YNL125C 2022 nt8.93□□□□□ -0.98
SRD1P09007 NAS6YGR232W 687 nt8.92□□□□□ -0.98
SRD1P09007 EMC3YKL207W 762 nt8.92□□□□□ -0.98
SRD1P09007 YMR210WYMR210W 1350 nt8.9□□□□□ -0.98
SRD1P09007 BUD20YLR074C 501 nt8.89□□□□□ -0.99
SRD1P09007 PET18YCR020C 648 nt8.88□□□□□ -0.99
SRD1P09007 CAK1YFL029C 1107 nt8.88□□□□□ -0.99
SRD1P09007 CHS7YHR142W 951 nt8.88□□□□□ -0.99
SRD1P09007 tE(CUC)DtE(CUC)D 72 nt8.87□□□□□ -0.99
SRD1P09007 tE(CUC)ItE(CUC)I 72 nt8.87□□□□□ -0.99
SRD1P09007 GRH1YDR517W 1119 nt8.87□□□□□ -0.99
SRD1P09007 MET22YOL064C 1074 nt8.87□□□□□ -0.99
SRD1P09007 YPL041CYPL041C 624 nt8.87□□□□□ -0.99
SRD1P09007 OCH1YGL038C 1443 nt8.87□□□□□ -0.99
SRD1P09007 INH1YDL181W 258 nt8.86□□□□□ -0.99
SRD1P09007 RRT14YIL127C 621 nt8.86□□□□□ -0.99
SRD1P09007 PAU21YOR394W 495 nt8.86□□□□□ -0.99
SRD1P09007 PAU22YPL282C 495 nt8.86□□□□□ -0.99
SRD1P09007 HXT10YFL011W 1641 nt8.86□□□□□ -0.99
SRD1P09007 YBL095WYBL095W 813 nt8.85□□□□□ -0.99
SRD1P09007 OLA1YBR025C 1185 nt8.84□□□□□ -0.99
SRD1P09007 AAC3YBR085W 924 nt8.84□□□□□ -0.99
SRD1P09007 YMC2YBR104W 990 nt8.84□□□□□ -0.99
SRD1P09007 TMS1YDR105C 1422 nt8.82□□□□□ -1
SRD1P09007 YIR035CYIR035C 765 nt8.82□□□□□ -1
SRD1P09007 RNA170RNA170 169 nt8.82□□□□□ -1
SRD1P09007 YOR343CYOR343C 327 nt8.82□□□□□ -1
SRD1P09007 HRA1HRA1 564 nt8.81□□□□□ -1
SRD1P09007 PDC6YGR087C 1692 nt8.81□□□□□ -1
SRD1P09007 YJR149WYJR149W 1215 nt8.8□□□□□ -1
SRD1P09007 MRS4YKR052C 915 nt8.8□□□□□ -1
SRD1P09007 AGP3YFL055W 1677 nt8.8□□□□□ -1
SRD1P09007 RFC1YOR217W 2586 nt8.8□□□□□ -1
SRD1P09007 NPP2YEL016C 1482 nt8.79□□□□□ -1
SRD1P09007 YEL009C-AYEL009C-A 408 nt8.79□□□□□ -1
SRD1P09007 UTR5YEL035C 501 nt8.79□□□□□ -1
SRD1P09007 YER156CYER156C 1017 nt8.79□□□□□ -1
SRD1P09007 MFT1YML062C 1179 nt8.79□□□□□ -1
SRD1P09007 YHR218WYHR218W 1812 nt8.79□□□□□ -1
SRD1P09007 PSD1YNL169C 1503 nt8.79□□□□□ -1
SRD1P09007 MRP1YDR347W 966 nt8.78□□□□□ -1
SRD1P09007 CYT1YOR065W 930 nt8.78□□□□□ -1
SRD1P09007 BUB2YMR055C 921 nt8.77□□□□□ -1.01
SRD1P09007 YRF1-2YER190W 5046 nt8.77□□□□□ -1.01
SRD1P09007 ADA2YDR448W 1305 nt8.77□□□□□ -1.01
SRD1P09007 COG1YGL223C 1254 nt8.76□□□□□ -1.01
Retrieved 100 of 7,029 protein–RNA pairs in 18.5 ms