Protein–RNA interactions for Protein: P00560

PGK1, Phosphoglycerate kinase, yeastyeast

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PGK1P00560 SRP102YKL154W 735 nt9.25□□□□□ -0.93
PGK1P00560 CRC1YOR100C 984 nt9.24□□□□□ -0.93
PGK1P00560 POP2YNR052C 1302 nt9.24□□□□□ -0.93
PGK1P00560 VBA3YCL069W 1377 nt9.24□□□□□ -0.93
PGK1P00560 SRP54YPR088C 1626 nt9.23□□□□□ -0.93
PGK1P00560 TGA1tA(UGC)A 73 nt9.23□□□□□ -0.93
PGK1P00560 tA(UGC)EtA(UGC)E 73 nt9.23□□□□□ -0.93
PGK1P00560 tA(UGC)GtA(UGC)G 73 nt9.23□□□□□ -0.93
PGK1P00560 tA(UGC)LtA(UGC)L 73 nt9.23□□□□□ -0.93
PGK1P00560 tA(UGC)OtA(UGC)O 73 nt9.23□□□□□ -0.93
PGK1P00560 YLR280CYLR280C 351 nt9.22□□□□□ -0.93
PGK1P00560 RCR1YBR005W 642 nt9.22□□□□□ -0.93
PGK1P00560 ERO1YML130C 1692 nt9.22□□□□□ -0.93
PGK1P00560 SNX3YOR357C 489 nt9.21□□□□□ -0.94
PGK1P00560 YER152W-AYER152W-A 567 nt9.2□□□□□ -0.94
PGK1P00560 FCY1YPR062W 477 nt9.2□□□□□ -0.94
PGK1P00560 YGR210CYGR210C 1236 nt9.19□□□□□ -0.94
PGK1P00560 RPD3YNL330C 1302 nt9.19□□□□□ -0.94
PGK1P00560 ZAP1YJL056C 2643 nt9.16□□□□□ -0.94
PGK1P00560 SAN1YDR143C 1833 nt9.16□□□□□ -0.94
PGK1P00560 YPT11YNL304W 1254 nt9.15□□□□□ -0.94
PGK1P00560 PSD1YNL169C 1503 nt9.15□□□□□ -0.95
PGK1P00560 RIM2YBR192W 1134 nt9.14□□□□□ -0.95
PGK1P00560 KGD2YDR148C 1392 nt9.13□□□□□ -0.95
PGK1P00560 YPL108WYPL108W 507 nt9.11□□□□□ -0.95
PGK1P00560 YFR020WYFR020W 699 nt9.1□□□□□ -0.95
PGK1P00560 CYT1YOR065W 930 nt9.1□□□□□ -0.95
PGK1P00560 DMA2YNL116W 1569 nt9.09□□□□□ -0.95
PGK1P00560 BUD20YLR074C 501 nt9.09□□□□□ -0.95
PGK1P00560 PTC6YCR079W 1329 nt9.08□□□□□ -0.96
PGK1P00560 GAS1YMR307W 1680 nt9.08□□□□□ -0.96
PGK1P00560 SBP1YHL034C 885 nt9.08□□□□□ -0.96
PGK1P00560 RSM7YJR113C 744 nt9.08□□□□□ -0.96
PGK1P00560 ESBP6YNL125C 2022 nt9.07□□□□□ -0.96
PGK1P00560 CWP2YKL096W-A 279 nt9.07□□□□□ -0.96
PGK1P00560 GTB1YDR221W 2109 nt9.07□□□□□ -0.96
PGK1P00560 RPC31YNL151C 756 nt9.06□□□□□ -0.96
PGK1P00560 SSL2YIL143C 2532 nt9.06□□□□□ -0.96
PGK1P00560 ILV2YMR108W 2064 nt9.05□□□□□ -0.96
PGK1P00560 YHL008CYHL008C 1884 nt9.04□□□□□ -0.96
PGK1P00560 KRR1YCL059C 951 nt9.04□□□□□ -0.96
PGK1P00560 YJL160CYJL160C 864 nt9.04□□□□□ -0.96
PGK1P00560 ODC1YPL134C 933 nt9.04□□□□□ -0.96
PGK1P00560 EMC3YKL207W 762 nt9.03□□□□□ -0.96
PGK1P00560 GRH1YDR517W 1119 nt9.02□□□□□ -0.97
PGK1P00560 YMR166CYMR166C 1107 nt9.02□□□□□ -0.97
PGK1P00560 LSP1YPL004C 1026 nt9.02□□□□□ -0.97
PGK1P00560 FRE6YLL051C 2139 nt9.02□□□□□ -0.97
PGK1P00560 PAU21YOR394W 495 nt9.01□□□□□ -0.97
PGK1P00560 PAU22YPL282C 495 nt9.01□□□□□ -0.97
PGK1P00560 YMR210WYMR210W 1350 nt8.99□□□□□ -0.97
PGK1P00560 YOR343CYOR343C 327 nt8.99□□□□□ -0.97
PGK1P00560 YLR460CYLR460C 1131 nt8.98□□□□□ -0.97
PGK1P00560 HRA1HRA1 564 nt8.97□□□□□ -0.97
PGK1P00560 DPL1YDR294C 1770 nt8.96□□□□□ -0.97
PGK1P00560 HXK1YFR053C 1458 nt8.96□□□□□ -0.97
PGK1P00560 PET18YCR020C 648 nt8.96□□□□□ -0.98
PGK1P00560 GAL2YLR081W 1725 nt8.96□□□□□ -0.98
PGK1P00560 YHR218WYHR218W 1812 nt8.96□□□□□ -0.98
PGK1P00560 GGA2YHR108W 1758 nt8.95□□□□□ -0.98
PGK1P00560 CAK1YFL029C 1107 nt8.93□□□□□ -0.98
PGK1P00560 DTR1YBR180W 1719 nt8.93□□□□□ -0.98
PGK1P00560 THI3YDL080C 1830 nt8.92□□□□□ -0.98
PGK1P00560 ALD5YER073W 1563 nt8.92□□□□□ -0.98
PGK1P00560 CHS7YHR142W 951 nt8.92□□□□□ -0.98
PGK1P00560 MDM35YKL053C-A 261 nt8.92□□□□□ -0.98
PGK1P00560 YMR316C-BYMR316C-B 309 nt8.92□□□□□ -0.98
PGK1P00560 YDR467CYDR467C 327 nt8.91□□□□□ -0.98
PGK1P00560 RRT14YIL127C 621 nt8.91□□□□□ -0.98
PGK1P00560 YAL016C-AYAL016C-A 315 nt8.91□□□□□ -0.98
PGK1P00560 GPM1YKL152C 744 nt8.91□□□□□ -0.98
PGK1P00560 OCH1YGL038C 1443 nt8.9□□□□□ -0.98
PGK1P00560 MRP1YDR347W 966 nt8.9□□□□□ -0.98
PGK1P00560 RPL12BYDR418W 498 nt8.9□□□□□ -0.98
PGK1P00560 MFT1YML062C 1179 nt8.89□□□□□ -0.99
PGK1P00560 MET22YOL064C 1074 nt8.89□□□□□ -0.99
PGK1P00560 HXT10YFL011W 1641 nt8.88□□□□□ -0.99
PGK1P00560 OLA1YBR025C 1185 nt8.88□□□□□ -0.99
PGK1P00560 UTR5YEL035C 501 nt8.87□□□□□ -0.99
PGK1P00560 LEU4YNL104C 1860 nt8.87□□□□□ -0.99
PGK1P00560 ADA2YDR448W 1305 nt8.86□□□□□ -0.99
PGK1P00560 YER156CYER156C 1017 nt8.85□□□□□ -0.99
PGK1P00560 GDH1YOR375C 1365 nt8.85□□□□□ -0.99
PGK1P00560 YIR035CYIR035C 765 nt8.83□□□□□ -1
PGK1P00560 PDC6YGR087C 1692 nt8.83□□□□□ -1
PGK1P00560 YPR084WYPR084W 1371 nt8.83□□□□□ -1
PGK1P00560 tL(UAA)B1tL(UAA)B1 84 nt8.82□□□□□ -1
PGK1P00560 tL(UAA)B2tL(UAA)B2 84 nt8.82□□□□□ -1
PGK1P00560 tL(UAA)DtL(UAA)D 84 nt8.82□□□□□ -1
PGK1P00560 SUP51tL(UAA)J 84 nt8.82□□□□□ -1
PGK1P00560 tL(UAA)KtL(UAA)K 84 nt8.82□□□□□ -1
PGK1P00560 tL(UAA)LtL(UAA)L 84 nt8.82□□□□□ -1
PGK1P00560 tL(UAA)NtL(UAA)N 84 nt8.82□□□□□ -1
PGK1P00560 YBL095WYBL095W 813 nt8.82□□□□□ -1
PGK1P00560 RPS6AYPL090C 711 nt8.82□□□□□ -1
PGK1P00560 RPS6BYBR181C 711 nt8.82□□□□□ -1
PGK1P00560 TOK1YJL093C 2076 nt8.82□□□□□ -1
PGK1P00560 RFC1YOR217W 2586 nt8.81□□□□□ -1
PGK1P00560 tE(CUC)DtE(CUC)D 72 nt8.81□□□□□ -1
PGK1P00560 tE(CUC)ItE(CUC)I 72 nt8.81□□□□□ -1
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms