Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
RHBDL3P58872 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RHBDL3P58872 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC8.28□□□□□ -1.08
RHBDL3P58872 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
RHBDL3P58872 RN7SKP146-201ENST00000410242 334 ntBASIC8.28□□□□□ -1.08
RHBDL3P58872 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC8.28□□□□□ -1.08
RHBDL3P58872 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RHBDL3P58872 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RHBDL3P58872 AL034369.1-201ENST00000453808 477 ntBASIC8.28□□□□□ -1.08
RHBDL3P58872 NMNAT1P3-201ENST00000457517 888 ntBASIC8.28□□□□□ -1.08
RHBDL3P58872 AC083806.1-201ENST00000468934 316 ntBASIC8.28□□□□□ -1.08
RHBDL3P58872 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC8.28□□□□□ -1.08
RHBDL3P58872 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
RHBDL3P58872 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC8.28□□□□□ -1.08
RHBDL3P58872 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC8.28□□□□□ -1.08
RHBDL3P58872 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC8.28□□□□□ -1.08
RHBDL3P58872 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC8.28□□□□□ -1.08
RHBDL3P58872 AL035410.2-201ENST00000604963 864 ntBASIC8.28□□□□□ -1.08
RHBDL3P58872 AC027559.1-201ENST00000636288 271 ntBASIC8.28□□□□□ -1.08
RHBDL3P58872 AC007603.3-201ENST00000636915 979 ntBASIC8.28□□□□□ -1.08
RHBDL3P58872 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC8.28□□□□□ -1.08
RHBDL3P58872 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC8.28□□□□□ -1.08
RHBDL3P58872 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
RHBDL3P58872 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC8.28□□□□□ -1.08
RHBDL3P58872 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC8.28□□□□□ -1.08
RHBDL3P58872 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
RHBDL3P58872 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RHBDL3P58872 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RHBDL3P58872 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
RHBDL3P58872 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
RHBDL3P58872 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RHBDL3P58872 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RHBDL3P58872 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
RHBDL3P58872 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC8.28□□□□□ -1.08
RHBDL3P58872 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RHBDL3P58872 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RHBDL3P58872 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC8.28□□□□□ -1.08
RHBDL3P58872 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RHBDL3P58872 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
RHBDL3P58872 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RHBDL3P58872 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
RHBDL3P58872 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC8.27□□□□□ -1.09
RHBDL3P58872 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RHBDL3P58872 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RHBDL3P58872 RGS5-202ENST00000367903 934 ntTSL 3 BASIC8.27□□□□□ -1.09
RHBDL3P58872 MIR191-201ENST00000384873 92 ntBASIC8.27□□□□□ -1.09
RHBDL3P58872 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
RHBDL3P58872 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RHBDL3P58872 AL590635.1-201ENST00000406314 586 ntBASIC8.27□□□□□ -1.09
RHBDL3P58872 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC8.27□□□□□ -1.09
RHBDL3P58872 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC8.27□□□□□ -1.09
RHBDL3P58872 AL596268.1-201ENST00000427910 1048 ntBASIC8.27□□□□□ -1.09
RHBDL3P58872 RPS26P11-201ENST00000463445 348 ntBASIC8.27□□□□□ -1.09
RHBDL3P58872 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC8.27□□□□□ -1.09
RHBDL3P58872 RPS26P6-201ENST00000475156 348 ntBASIC8.27□□□□□ -1.09
RHBDL3P58872 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC8.27□□□□□ -1.09
RHBDL3P58872 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC8.27□□□□□ -1.09
RHBDL3P58872 RNA5SP278-201ENST00000517055 102 ntBASIC8.27□□□□□ -1.09
RHBDL3P58872 IGKV2D-38-201ENST00000518423 240 ntBASIC8.27□□□□□ -1.09
RHBDL3P58872 SETP17-201ENST00000534163 817 ntBASIC8.27□□□□□ -1.09
RHBDL3P58872 GNG2-203ENST00000553432 577 ntTSL 4 BASIC8.27□□□□□ -1.09
RHBDL3P58872 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC8.27□□□□□ -1.09
RHBDL3P58872 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC8.27□□□□□ -1.09
RHBDL3P58872 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC8.27□□□□□ -1.09
RHBDL3P58872 MIR6823-201ENST00000622118 61 ntBASIC8.27□□□□□ -1.09
RHBDL3P58872 AC002044.3-201ENST00000623314 541 ntBASIC8.27□□□□□ -1.09
RHBDL3P58872 CLUHP10-201ENST00000631979 980 ntBASIC8.27□□□□□ -1.09
RHBDL3P58872 AL359694.2-201ENST00000567753 1615 ntBASIC8.27□□□□□ -1.09
RHBDL3P58872 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC8.27□□□□□ -1.09
RHBDL3P58872 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RHBDL3P58872 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC8.27□□□□□ -1.09
RHBDL3P58872 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
RHBDL3P58872 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.27□□□□□ -1.09
RHBDL3P58872 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RHBDL3P58872 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RHBDL3P58872 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RHBDL3P58872 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
RHBDL3P58872 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RHBDL3P58872 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.27□□□□□ -1.09
RHBDL3P58872 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RHBDL3P58872 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
RHBDL3P58872 MFSD8-218ENST00000641186 4448 ntBASIC8.26□□□□□ -1.09
RHBDL3P58872 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RHBDL3P58872 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RHBDL3P58872 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
RHBDL3P58872 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RHBDL3P58872 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
RHBDL3P58872 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
RHBDL3P58872 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
RHBDL3P58872 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
RHBDL3P58872 RPL24P4-201ENST00000326586 421 ntBASIC8.26□□□□□ -1.09
RHBDL3P58872 SNORA70G-201ENST00000383923 142 ntBASIC8.26□□□□□ -1.09
RHBDL3P58872 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC8.26□□□□□ -1.09
RHBDL3P58872 FDPSP5-201ENST00000399474 1057 ntBASIC8.26□□□□□ -1.09
RHBDL3P58872 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC8.26□□□□□ -1.09
RHBDL3P58872 AL050305.1-201ENST00000399993 1230 ntBASIC8.26□□□□□ -1.09
RHBDL3P58872 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC8.26□□□□□ -1.09
RHBDL3P58872 NPM1P36-201ENST00000415681 835 ntBASIC8.26□□□□□ -1.09
RHBDL3P58872 AKR1B10P1-201ENST00000425765 942 ntBASIC8.26□□□□□ -1.09
RHBDL3P58872 HMGN1P6-201ENST00000438508 291 ntBASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms