Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
NEK3P51956 AL121985.2-201ENST00000621192 555 ntBASIC7.42□□□□□ -1.22
NEK3P51956 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC7.42□□□□□ -1.22
NEK3P51956 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC7.42□□□□□ -1.22
NEK3P51956 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NEK3P51956 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
NEK3P51956 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NEK3P51956 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.42□□□□□ -1.22
NEK3P51956 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.42□□□□□ -1.22
NEK3P51956 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC7.42□□□□□ -1.22
NEK3P51956 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NEK3P51956 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.42□□□□□ -1.22
NEK3P51956 MAPK10-323ENST00000641493 3207 ntBASIC7.42□□□□□ -1.22
NEK3P51956 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NEK3P51956 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.41□□□□□ -1.22
NEK3P51956 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.41□□□□□ -1.22
NEK3P51956 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NEK3P51956 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.41□□□□□ -1.22
NEK3P51956 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
NEK3P51956 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NEK3P51956 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NEK3P51956 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.41□□□□□ -1.22
NEK3P51956 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
NEK3P51956 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NEK3P51956 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.41□□□□□ -1.22
NEK3P51956 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.41□□□□□ -1.22
NEK3P51956 AP003471.1-202ENST00000319051 1988 ntBASIC7.41□□□□□ -1.22
NEK3P51956 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.41□□□□□ -1.22
NEK3P51956 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
NEK3P51956 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
NEK3P51956 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NEK3P51956 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NEK3P51956 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NEK3P51956 RNA5SP355-201ENST00000365317 135 ntBASIC7.41□□□□□ -1.22
NEK3P51956 U3.14-201ENST00000365363 227 ntBASIC7.41□□□□□ -1.22
NEK3P51956 MIR7-1-201ENST00000384871 110 ntBASIC7.41□□□□□ -1.22
NEK3P51956 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
NEK3P51956 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.41□□□□□ -1.22
NEK3P51956 SNORA3.1-201ENST00000408166 111 ntBASIC7.41□□□□□ -1.22
NEK3P51956 XIST-201ENST00000416330 750 ntTSL 2 BASIC7.41□□□□□ -1.22
NEK3P51956 RSL24D1P8-201ENST00000434442 492 ntBASIC7.41□□□□□ -1.22
NEK3P51956 AL158214.1-201ENST00000444423 404 ntBASIC7.41□□□□□ -1.22
NEK3P51956 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.41□□□□□ -1.22
NEK3P51956 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.41□□□□□ -1.22
NEK3P51956 RN7SL251P-201ENST00000464175 297 ntBASIC7.41□□□□□ -1.22
NEK3P51956 AC073648.3-201ENST00000504939 925 ntBASIC7.41□□□□□ -1.22
NEK3P51956 CHCHD2P7-201ENST00000508008 452 ntBASIC7.41□□□□□ -1.22
NEK3P51956 AC112225.1-201ENST00000508230 297 ntBASIC7.41□□□□□ -1.22
NEK3P51956 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NEK3P51956 MTND2P31-201ENST00000512602 616 ntBASIC7.41□□□□□ -1.22
NEK3P51956 Vault.2-201ENST00000516519 98 ntBASIC7.41□□□□□ -1.22
NEK3P51956 BMPR1APS2-201ENST00000527904 1012 ntBASIC7.41□□□□□ -1.22
NEK3P51956 AP004607.5-201ENST00000532034 217 ntBASIC7.41□□□□□ -1.22
NEK3P51956 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC7.41□□□□□ -1.22
NEK3P51956 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.41□□□□□ -1.22
NEK3P51956 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC7.41□□□□□ -1.22
NEK3P51956 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC7.41□□□□□ -1.22
NEK3P51956 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NEK3P51956 CRADD-210ENST00000552033 622 ntTSL 3 BASIC7.41□□□□□ -1.22
NEK3P51956 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC7.41□□□□□ -1.22
NEK3P51956 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NEK3P51956 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC7.41□□□□□ -1.22
NEK3P51956 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.41□□□□□ -1.22
NEK3P51956 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7.41□□□□□ -1.22
NEK3P51956 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NEK3P51956 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.41□□□□□ -1.22
NEK3P51956 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.41□□□□□ -1.22
NEK3P51956 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC7.41□□□□□ -1.22
NEK3P51956 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NEK3P51956 WNK1-220ENST00000574564 1401 ntBASIC7.41□□□□□ -1.22
NEK3P51956 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NEK3P51956 NAMPTP1-201ENST00000440465 2514 ntBASIC7.41□□□□□ -1.22
NEK3P51956 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NEK3P51956 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
NEK3P51956 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NEK3P51956 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
NEK3P51956 AC079178.2-201ENST00000439323 1624 ntBASIC7.41□□□□□ -1.22
NEK3P51956 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
NEK3P51956 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NEK3P51956 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC7.41□□□□□ -1.22
NEK3P51956 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.4□□□□□ -1.22
NEK3P51956 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NEK3P51956 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.4□□□□□ -1.22
NEK3P51956 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.4□□□□□ -1.22
NEK3P51956 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.4□□□□□ -1.22
NEK3P51956 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
NEK3P51956 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.4□□□□□ -1.22
NEK3P51956 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NEK3P51956 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.22
NEK3P51956 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
NEK3P51956 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NEK3P51956 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NEK3P51956 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
NEK3P51956 MIR431-201ENST00000385266 114 ntBASIC7.4□□□□□ -1.22
NEK3P51956 NPM1P31-201ENST00000399021 764 ntBASIC7.4□□□□□ -1.22
NEK3P51956 RNU6-564P-201ENST00000410983 104 ntBASIC7.4□□□□□ -1.22
NEK3P51956 AL773545.3-201ENST00000414297 706 ntBASIC7.4□□□□□ -1.22
NEK3P51956 AL161742.1-201ENST00000418154 584 ntBASIC7.4□□□□□ -1.22
NEK3P51956 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC7.4□□□□□ -1.22
NEK3P51956 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms