Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RB1P06400 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.47□□□□□ -1.21
RB1P06400 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC7.47□□□□□ -1.21
RB1P06400 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RB1P06400 RPSAP32-201ENST00000432681 526 ntBASIC7.47□□□□□ -1.21
RB1P06400 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC7.47□□□□□ -1.21
RB1P06400 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.47□□□□□ -1.21
RB1P06400 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC7.47□□□□□ -1.21
RB1P06400 RPS10P18-201ENST00000442662 495 ntBASIC7.47□□□□□ -1.21
RB1P06400 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC7.47□□□□□ -1.21
RB1P06400 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.47□□□□□ -1.21
RB1P06400 AC144530.1-201ENST00000452862 555 ntBASIC7.47□□□□□ -1.21
RB1P06400 OR7E22P-201ENST00000478335 1035 ntBASIC7.47□□□□□ -1.21
RB1P06400 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.47□□□□□ -1.21
RB1P06400 AC010442.1-201ENST00000515583 816 ntBASIC7.47□□□□□ -1.21
RB1P06400 RNA5SP278-201ENST00000517055 102 ntBASIC7.47□□□□□ -1.21
RB1P06400 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
RB1P06400 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC7.47□□□□□ -1.21
RB1P06400 TOMM20P1-201ENST00000534518 427 ntBASIC7.47□□□□□ -1.21
RB1P06400 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.47□□□□□ -1.21
RB1P06400 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.47□□□□□ -1.21
RB1P06400 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
RB1P06400 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC7.47□□□□□ -1.21
RB1P06400 NDUFA5P11-201ENST00000567995 343 ntBASIC7.47□□□□□ -1.21
RB1P06400 PPIAP14-201ENST00000577627 496 ntBASIC7.47□□□□□ -1.21
RB1P06400 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC7.47□□□□□ -1.21
RB1P06400 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC7.47□□□□□ -1.21
RB1P06400 AC011891.2-201ENST00000604949 397 ntBASIC7.47□□□□□ -1.21
RB1P06400 AC012676.3-201ENST00000614983 479 ntBASIC7.47□□□□□ -1.21
RB1P06400 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RB1P06400 RPSAP68-201ENST00000625020 438 ntBASIC7.47□□□□□ -1.21
RB1P06400 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.47□□□□□ -1.21
RB1P06400 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.47□□□□□ -1.21
RB1P06400 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.47□□□□□ -1.21
RB1P06400 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RB1P06400 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RB1P06400 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
RB1P06400 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
RB1P06400 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.47□□□□□ -1.21
RB1P06400 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.47□□□□□ -1.21
RB1P06400 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.47□□□□□ -1.21
RB1P06400 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
RB1P06400 AC010132.4-201ENST00000569883 1368 ntBASIC7.46□□□□□ -1.21
RB1P06400 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
RB1P06400 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.46□□□□□ -1.21
RB1P06400 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
RB1P06400 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.46□□□□□ -1.21
RB1P06400 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
RB1P06400 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.46□□□□□ -1.21
RB1P06400 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
RB1P06400 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
RB1P06400 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
RB1P06400 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
RB1P06400 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
RB1P06400 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RB1P06400 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RB1P06400 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RB1P06400 RNA5SP232-201ENST00000364144 119 ntBASIC7.46□□□□□ -1.22
RB1P06400 RN7SKP15-201ENST00000364742 309 ntBASIC7.46□□□□□ -1.22
RB1P06400 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RB1P06400 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RB1P06400 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RB1P06400 AC092642.1-201ENST00000392417 425 ntBASIC7.46□□□□□ -1.22
RB1P06400 MIR1275-201ENST00000408770 80 ntBASIC7.46□□□□□ -1.22
RB1P06400 RN7SKP188-201ENST00000410789 317 ntBASIC7.46□□□□□ -1.22
RB1P06400 AC245047.5-201ENST00000437312 556 ntBASIC7.46□□□□□ -1.22
RB1P06400 AL390728.3-201ENST00000452704 270 ntBASIC7.46□□□□□ -1.22
RB1P06400 AC010878.1-201ENST00000456500 1047 ntBASIC7.46□□□□□ -1.22
RB1P06400 RPL23AP8-201ENST00000479812 475 ntBASIC7.46□□□□□ -1.22
RB1P06400 AC022296.2-201ENST00000512424 202 ntBASIC7.46□□□□□ -1.22
RB1P06400 SETP17-201ENST00000534163 817 ntBASIC7.46□□□□□ -1.22
RB1P06400 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC7.46□□□□□ -1.22
RB1P06400 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
RB1P06400 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.46□□□□□ -1.22
RB1P06400 AC012175.1-201ENST00000603755 531 ntBASIC7.46□□□□□ -1.22
RB1P06400 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC7.46□□□□□ -1.22
RB1P06400 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.46□□□□□ -1.22
RB1P06400 AC089999.3-201ENST00000622440 577 ntBASIC7.46□□□□□ -1.22
RB1P06400 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RB1P06400 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.46□□□□□ -1.22
RB1P06400 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.46□□□□□ -1.22
RB1P06400 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC7.46□□□□□ -1.22
RB1P06400 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RB1P06400 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RB1P06400 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RB1P06400 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.46□□□□□ -1.22
RB1P06400 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RB1P06400 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RB1P06400 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
RB1P06400 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RB1P06400 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC7.46□□□□□ -1.22
RB1P06400 AC051619.3-201ENST00000560646 2426 ntBASIC7.46□□□□□ -1.22
RB1P06400 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RB1P06400 NR1H5P-201ENST00000452683 1377 ntBASIC7.46□□□□□ -1.22
RB1P06400 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.45□□□□□ -1.22
RB1P06400 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RB1P06400 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RB1P06400 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.45□□□□□ -1.22
RB1P06400 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
RB1P06400 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms