Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
UBE4BO95155 RN7SKP268-201ENST00000411107 316 ntBASIC7.57□□□□□ -1.2
UBE4BO95155 MICG-208ENST00000416822 132 ntBASIC7.57□□□□□ -1.2
UBE4BO95155 AC114402.2-201ENST00000432760 643 ntBASIC7.57□□□□□ -1.2
UBE4BO95155 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.57□□□□□ -1.2
UBE4BO95155 CRYGGP-201ENST00000443337 145 ntBASIC7.57□□□□□ -1.2
UBE4BO95155 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.57□□□□□ -1.2
UBE4BO95155 GOT2P2-201ENST00000450663 1251 ntBASIC7.57□□□□□ -1.2
UBE4BO95155 AL096803.1-201ENST00000456921 1021 ntBASIC7.57□□□□□ -1.2
UBE4BO95155 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.57□□□□□ -1.2
UBE4BO95155 PPP1R2P6-201ENST00000478565 588 ntBASIC7.57□□□□□ -1.2
UBE4BO95155 AC018639.1-201ENST00000492994 442 ntBASIC7.57□□□□□ -1.2
UBE4BO95155 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC7.57□□□□□ -1.2
UBE4BO95155 AL132640.1-201ENST00000559594 619 ntBASIC7.57□□□□□ -1.2
UBE4BO95155 MIR5682-201ENST00000584864 76 ntBASIC7.57□□□□□ -1.2
UBE4BO95155 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.57□□□□□ -1.2
UBE4BO95155 AC020914.7-201ENST00000594477 545 ntBASIC7.57□□□□□ -1.2
UBE4BO95155 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC7.57□□□□□ -1.2
UBE4BO95155 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.57□□□□□ -1.2
UBE4BO95155 AC103564.3-201ENST00000621194 220 ntBASIC7.57□□□□□ -1.2
UBE4BO95155 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.57□□□□□ -1.2
UBE4BO95155 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
UBE4BO95155 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
UBE4BO95155 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
UBE4BO95155 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
UBE4BO95155 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
UBE4BO95155 AL117339.4-201ENST00000608335 7063 ntBASIC7.57□□□□□ -1.2
UBE4BO95155 AP002800.1-201ENST00000624982 2225 ntBASIC7.57□□□□□ -1.2
UBE4BO95155 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
UBE4BO95155 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.57□□□□□ -1.2
UBE4BO95155 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
UBE4BO95155 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.57□□□□□ -1.2
UBE4BO95155 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.57□□□□□ -1.2
UBE4BO95155 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
UBE4BO95155 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
UBE4BO95155 MAPK10-323ENST00000641493 3207 ntBASIC7.57□□□□□ -1.2
UBE4BO95155 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.57□□□□□ -1.2
UBE4BO95155 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
UBE4BO95155 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.57□□□□□ -1.2
UBE4BO95155 AC119674.1-204ENST00000641348 1343 ntBASIC7.57□□□□□ -1.2
UBE4BO95155 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
UBE4BO95155 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
UBE4BO95155 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC7.56□□□□□ -1.2
UBE4BO95155 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
UBE4BO95155 Z97989.1-201ENST00000531702 2421 ntBASIC7.56□□□□□ -1.2
UBE4BO95155 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
UBE4BO95155 RNA5SP442-201ENST00000365050 107 ntBASIC7.56□□□□□ -1.2
UBE4BO95155 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
UBE4BO95155 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.56□□□□□ -1.2
UBE4BO95155 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.56□□□□□ -1.2
UBE4BO95155 PUDPP2-201ENST00000431423 643 ntBASIC7.56□□□□□ -1.2
UBE4BO95155 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC7.56□□□□□ -1.2
UBE4BO95155 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.56□□□□□ -1.2
UBE4BO95155 ST13P21-201ENST00000453250 1098 ntBASIC7.56□□□□□ -1.2
UBE4BO95155 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC7.56□□□□□ -1.2
UBE4BO95155 RPS26P11-201ENST00000463445 348 ntBASIC7.56□□□□□ -1.2
UBE4BO95155 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
UBE4BO95155 RPS26P6-201ENST00000475156 348 ntBASIC7.56□□□□□ -1.2
UBE4BO95155 RN7SL518P-201ENST00000491887 280 ntBASIC7.56□□□□□ -1.2
UBE4BO95155 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.56□□□□□ -1.2
UBE4BO95155 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.56□□□□□ -1.2
UBE4BO95155 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC7.56□□□□□ -1.2
UBE4BO95155 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC7.56□□□□□ -1.2
UBE4BO95155 DCN-215ENST00000550099 719 ntTSL 2 BASIC7.56□□□□□ -1.2
UBE4BO95155 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC7.56□□□□□ -1.2
UBE4BO95155 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC7.56□□□□□ -1.2
UBE4BO95155 AC126323.4-201ENST00000566935 234 ntBASIC7.56□□□□□ -1.2
UBE4BO95155 RN7SL426P-201ENST00000579106 295 ntBASIC7.56□□□□□ -1.2
UBE4BO95155 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.56□□□□□ -1.2
UBE4BO95155 MIR3159-201ENST00000584572 74 ntBASIC7.56□□□□□ -1.2
UBE4BO95155 AC020765.1-201ENST00000604296 328 ntBASIC7.56□□□□□ -1.2
UBE4BO95155 AC013731.1-201ENST00000604340 883 ntBASIC7.56□□□□□ -1.2
UBE4BO95155 AL035410.2-201ENST00000604963 864 ntBASIC7.56□□□□□ -1.2
UBE4BO95155 AC004908.1-201ENST00000606572 541 ntBASIC7.56□□□□□ -1.2
UBE4BO95155 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.56□□□□□ -1.2
UBE4BO95155 MIR665-201ENST00000635949 72 ntBASIC7.56□□□□□ -1.2
UBE4BO95155 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
UBE4BO95155 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC7.56□□□□□ -1.2
UBE4BO95155 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
UBE4BO95155 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
UBE4BO95155 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
UBE4BO95155 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
UBE4BO95155 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
UBE4BO95155 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
UBE4BO95155 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
UBE4BO95155 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.56□□□□□ -1.2
UBE4BO95155 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.56□□□□□ -1.2
UBE4BO95155 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
UBE4BO95155 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
UBE4BO95155 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
UBE4BO95155 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
UBE4BO95155 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
UBE4BO95155 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.56□□□□□ -1.2
UBE4BO95155 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.56□□□□□ -1.2
UBE4BO95155 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.56□□□□□ -1.2
UBE4BO95155 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
UBE4BO95155 MIR99A-201ENST00000384906 81 ntBASIC7.55□□□□□ -1.2
UBE4BO95155 MIR541-201ENST00000401360 84 ntBASIC7.55□□□□□ -1.2
UBE4BO95155 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
UBE4BO95155 AL117344.1-201ENST00000407196 616 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms