Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 AP000641.1-201ENST00000531988 1639 ntBASIC6.47□□□□□ -1.37
CCNB1IP1Q9NPC3 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.46□□□□□ -1.37
CCNB1IP1Q9NPC3 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CCNB1IP1Q9NPC3 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CCNB1IP1Q9NPC3 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
CCNB1IP1Q9NPC3 EEF1A1P22-201ENST00000559385 1380 ntBASIC6.46□□□□□ -1.37
CCNB1IP1Q9NPC3 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC6.46□□□□□ -1.37
CCNB1IP1Q9NPC3 AC025809.2-201ENST00000625085 1802 ntBASIC6.46□□□□□ -1.37
CCNB1IP1Q9NPC3 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.46□□□□□ -1.37
CCNB1IP1Q9NPC3 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC6.46□□□□□ -1.37
CCNB1IP1Q9NPC3 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 RN7SKP225-201ENST00000410405 352 ntBASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 AL355862.1-201ENST00000412705 353 ntBASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 AC109638.1-201ENST00000417406 326 ntBASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 AL451136.1-201ENST00000435399 325 ntBASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 PARP4P1-201ENST00000435945 2337 ntBASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 RPL5P27-201ENST00000437011 881 ntBASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 OR7E62P-201ENST00000456741 477 ntBASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 RN7SL282P-201ENST00000479676 297 ntBASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 RN7SL797P-201ENST00000486314 297 ntBASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 RPL17P2-201ENST00000491913 451 ntBASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 RN7SL445P-201ENST00000495609 293 ntBASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 RN7SL516P-201ENST00000496127 297 ntBASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 RN7SL311P-201ENST00000579858 306 ntBASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 BOLA2P1-201ENST00000584794 232 ntBASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 AL121809.2-201ENST00000613169 341 ntBASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 AC026951.2-201ENST00000613847 241 ntBASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 MIR6807-201ENST00000621968 92 ntBASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 AL033543.1-201ENST00000623440 13454 ntBASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 AL359694.2-201ENST00000567753 1615 ntBASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 MKI67P1-201ENST00000604297 1460 ntBASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 AC062029.1-202ENST00000606164 3651 ntBASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 AL139384.2-201ENST00000613809 3590 ntBASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCNB1IP1Q9NPC3 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.45□□□□□ -1.38
CCNB1IP1Q9NPC3 API5P1-201ENST00000424316 1510 ntBASIC6.45□□□□□ -1.38
CCNB1IP1Q9NPC3 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CCNB1IP1Q9NPC3 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC6.45□□□□□ -1.38
CCNB1IP1Q9NPC3 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCNB1IP1Q9NPC3 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CCNB1IP1Q9NPC3 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCNB1IP1Q9NPC3 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCNB1IP1Q9NPC3 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CCNB1IP1Q9NPC3 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCNB1IP1Q9NPC3 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCNB1IP1Q9NPC3 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCNB1IP1Q9NPC3 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CCNB1IP1Q9NPC3 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCNB1IP1Q9NPC3 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCNB1IP1Q9NPC3 RNA5SP260-201ENST00000363849 111 ntBASIC6.45□□□□□ -1.38
CCNB1IP1Q9NPC3 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCNB1IP1Q9NPC3 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CCNB1IP1Q9NPC3 RNU6-1055P-201ENST00000391085 107 ntBASIC6.45□□□□□ -1.38
CCNB1IP1Q9NPC3 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC6.45□□□□□ -1.38
CCNB1IP1Q9NPC3 FTOP1-201ENST00000419363 861 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms