Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 IREB2-208ENST00000560440 4396 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SNED1Q8TER0 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNED1Q8TER0 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SNED1Q8TER0 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
SNED1Q8TER0 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SNED1Q8TER0 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC8.31□□□□□ -1.08
SNED1Q8TER0 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC8.31□□□□□ -1.08
SNED1Q8TER0 AL645939.3-201ENST00000435408 225 ntBASIC8.31□□□□□ -1.08
SNED1Q8TER0 GAPDHP33-201ENST00000443168 1013 ntBASIC8.31□□□□□ -1.08
SNED1Q8TER0 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC8.31□□□□□ -1.08
SNED1Q8TER0 RN7SL216P-201ENST00000471607 298 ntBASIC8.31□□□□□ -1.08
SNED1Q8TER0 PFN2-217ENST00000498307 556 ntTSL 4 BASIC8.31□□□□□ -1.08
SNED1Q8TER0 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC8.31□□□□□ -1.08
SNED1Q8TER0 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC8.31□□□□□ -1.08
SNED1Q8TER0 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC8.31□□□□□ -1.08
SNED1Q8TER0 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC8.31□□□□□ -1.08
SNED1Q8TER0 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC8.31□□□□□ -1.08
SNED1Q8TER0 AC004805.3-201ENST00000603178 310 ntBASIC8.31□□□□□ -1.08
SNED1Q8TER0 SNX18P10-201ENST00000625014 519 ntBASIC8.31□□□□□ -1.08
SNED1Q8TER0 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC8.31□□□□□ -1.08
SNED1Q8TER0 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNED1Q8TER0 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SNED1Q8TER0 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SNED1Q8TER0 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNED1Q8TER0 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNED1Q8TER0 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNED1Q8TER0 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC8.31□□□□□ -1.08
SNED1Q8TER0 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SNED1Q8TER0 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC8.31□□□□□ -1.08
SNED1Q8TER0 MAPK10-379ENST00000642013 1385 ntBASIC8.3□□□□□ -1.08
SNED1Q8TER0 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SNED1Q8TER0 AC020978.6-201ENST00000571197 3177 ntBASIC8.3□□□□□ -1.08
SNED1Q8TER0 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SNED1Q8TER0 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SNED1Q8TER0 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SNED1Q8TER0 SNORA77.2-201ENST00000408571 112 ntBASIC8.3□□□□□ -1.08
SNED1Q8TER0 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC8.3□□□□□ -1.08
SNED1Q8TER0 AL360013.1-201ENST00000419031 858 ntBASIC8.3□□□□□ -1.08
SNED1Q8TER0 VN1R20P-201ENST00000425215 966 ntBASIC8.3□□□□□ -1.08
SNED1Q8TER0 AC242426.1-201ENST00000435270 960 ntBASIC8.3□□□□□ -1.08
SNED1Q8TER0 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC8.3□□□□□ -1.08
SNED1Q8TER0 AC005017.1-201ENST00000482002 490 ntBASIC8.3□□□□□ -1.08
SNED1Q8TER0 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC8.3□□□□□ -1.08
SNED1Q8TER0 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC8.3□□□□□ -1.08
SNED1Q8TER0 RN7SL187P-201ENST00000495587 303 ntBASIC8.3□□□□□ -1.08
SNED1Q8TER0 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SNED1Q8TER0 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC8.3□□□□□ -1.08
SNED1Q8TER0 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC8.3□□□□□ -1.08
SNED1Q8TER0 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC8.3□□□□□ -1.08
SNED1Q8TER0 CTSLP2-201ENST00000580501 394 ntBASIC8.3□□□□□ -1.08
SNED1Q8TER0 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC8.3□□□□□ -1.08
SNED1Q8TER0 AC026898.1-201ENST00000586404 571 ntBASIC8.3□□□□□ -1.08
SNED1Q8TER0 AC124916.2-201ENST00000604416 224 ntBASIC8.3□□□□□ -1.08
SNED1Q8TER0 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC8.3□□□□□ -1.08
SNED1Q8TER0 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC8.3□□□□□ -1.08
SNED1Q8TER0 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
SNED1Q8TER0 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
SNED1Q8TER0 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
SNED1Q8TER0 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SNED1Q8TER0 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC8.3□□□□□ -1.08
SNED1Q8TER0 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SNED1Q8TER0 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
SNED1Q8TER0 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SNED1Q8TER0 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC8.3□□□□□ -1.08
SNED1Q8TER0 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SNED1Q8TER0 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SNED1Q8TER0 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.3□□□□□ -1.08
SNED1Q8TER0 MAPK10-383ENST00000642032 3390 ntBASIC8.3□□□□□ -1.08
SNED1Q8TER0 CDY7P-201ENST00000429883 1604 ntBASIC8.3□□□□□ -1.08
SNED1Q8TER0 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC8.3□□□□□ -1.08
SNED1Q8TER0 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC8.3□□□□□ -1.08
SNED1Q8TER0 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
SNED1Q8TER0 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
SNED1Q8TER0 LRRC37A15P-201ENST00000514785 1355 ntBASIC8.3□□□□□ -1.08
SNED1Q8TER0 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
SNED1Q8TER0 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 RN7SKP237-201ENST00000364663 301 ntBASIC8.29□□□□□ -1.08
SNED1Q8TER0 PSMA6P1-201ENST00000400275 741 ntBASIC8.29□□□□□ -1.08
SNED1Q8TER0 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SNED1Q8TER0 AC009500.1-201ENST00000420684 583 ntBASIC8.29□□□□□ -1.08
SNED1Q8TER0 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 RN7SL371P-201ENST00000578099 267 ntBASIC8.29□□□□□ -1.08
SNED1Q8TER0 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNED1Q8TER0 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNED1Q8TER0 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SNED1Q8TER0 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms