Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CYCSP44-201ENST00000448560 313 ntBASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 AC135721.2-201ENST00000464237 300 ntBASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 RN7SL647P-201ENST00000485429 300 ntBASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 AP004607.6-201ENST00000525033 1202 ntBASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 AC068790.1-201ENST00000536166 355 ntBASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 AC233290.1-201ENST00000553021 1186 ntBASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 AC027271.1-201ENST00000610270 610 ntBASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 MIR6762-201ENST00000613340 86 ntBASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 AC034229.6-201ENST00000623704 224 ntBASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 AC005785.2-201ENST00000624655 631 ntBASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 AC127071.1-201ENST00000624997 712 ntBASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 DDX43P1-201ENST00000510713 1763 ntBASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 UGT2B27P-201ENST00000505092 1620 ntBASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 MFSD8-256ENST00000641949 1640 ntBASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CCDC50Q8IVM0 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 AC009779.8-201ENST00000641684 4384 ntBASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 AL139384.2-201ENST00000613809 3590 ntBASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 RPL12P13-201ENST00000310055 497 ntBASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 RPL7P58-201ENST00000402913 758 ntBASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 SNORA81.1-201ENST00000458922 177 ntBASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 RN7SL815P-201ENST00000470970 290 ntBASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 RPL23AP8-201ENST00000479812 475 ntBASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 HNRNPA1P17-201ENST00000496620 924 ntBASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 AP006437.1-202ENST00000530327 933 ntBASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 AL049869.4-201ENST00000555669 178 ntBASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 UBE2CP4-201ENST00000561405 535 ntBASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 EEF1B2P1-201ENST00000567221 672 ntBASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 PRR13P5-201ENST00000596581 442 ntBASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 AC008385.1-201ENST00000604421 355 ntBASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 AC063962.1-201ENST00000608199 521 ntBASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 AC026333.4-201ENST00000613543 544 ntBASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 AC110597.1-201ENST00000562669 3176 ntBASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.36□□□□□ -1.23
CCDC50Q8IVM0 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 CCDC150P1-201ENST00000537123 2215 ntBASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 RPL12P1-201ENST00000374520 498 ntBASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 RN7SKP85-201ENST00000411349 318 ntBASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 GAPDHP38-201ENST00000503632 1002 ntBASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 SNORA81.2-201ENST00000516868 170 ntBASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 AC087575.1-201ENST00000585087 229 ntBASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 AL352984.2-201ENST00000611153 546 ntBASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 AL049541.2-201ENST00000626377 555 ntBASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CCDC50Q8IVM0 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms