Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.85□□□□□ -1.31
CCDC187A0A096LP49 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
CCDC187A0A096LP49 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC187A0A096LP49 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC187A0A096LP49 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC187A0A096LP49 TNFSF15-201ENST00000374044 2789 ntBASIC6.85□□□□□ -1.31
CCDC187A0A096LP49 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 AP003175.1-201ENST00000641383 6658 ntBASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 RNA5SP472-201ENST00000363868 119 ntBASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 MIR621-201ENST00000384919 96 ntBASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 SUMO2P13-201ENST00000403109 272 ntBASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 AL136116.2-201ENST00000404020 785 ntBASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 AL590240.2-201ENST00000413370 894 ntBASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 RPLP1P10-201ENST00000413972 339 ntBASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 RAC1P4-201ENST00000419413 579 ntBASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 AC006509.1-201ENST00000420788 634 ntBASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 OR5M13P-201ENST00000433944 937 ntBASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 AL445991.1-201ENST00000450381 475 ntBASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 AL034369.1-201ENST00000453808 477 ntBASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 AP001960.1-201ENST00000506494 658 ntBASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 AC069542.2-201ENST00000624816 216 ntBASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC187A0A096LP49 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
CCDC187A0A096LP49 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.84□□□□□ -1.32
CCDC187A0A096LP49 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.84□□□□□ -1.32
CCDC187A0A096LP49 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CCDC187A0A096LP49 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 AC018992.1-201ENST00000523778 2149 ntBASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 AL359263.1-201ENST00000441188 2796 ntBASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 AL096816.1-201ENST00000623300 2920 ntBASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 PPIAP22-201ENST00000358455 498 ntBASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 RAB5CP1-201ENST00000395972 580 ntBASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 RN7SKP91-201ENST00000410852 288 ntBASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 USP9YP19-201ENST00000412165 485 ntBASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 PTPN2P1-201ENST00000423212 1072 ntBASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 EAF2-202ENST00000451944 960 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 AC089999.1-201ENST00000460336 374 ntBASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 RN7SL393P-201ENST00000463588 296 ntBASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 RN7SL751P-201ENST00000473281 284 ntBASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 AC108120.1-201ENST00000506543 991 ntBASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC187A0A096LP49 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms