Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 AL596244.1-201ENST00000567068 3779 ntBASIC6.64□□□□□ -1.35
SNX18Q96RF0 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SNX18Q96RF0 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SNX18Q96RF0 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.64□□□□□ -1.35
SNX18Q96RF0 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SNX18Q96RF0 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SNX18Q96RF0 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SNX18Q96RF0 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 RN7SKP1-201ENST00000365525 307 ntBASIC6.63□□□□□ -1.35
SNX18Q96RF0 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SNX18Q96RF0 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SNX18Q96RF0 RNU6-891P-201ENST00000384280 111 ntBASIC6.63□□□□□ -1.35
SNX18Q96RF0 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SNX18Q96RF0 MED15P9-201ENST00000424716 533 ntBASIC6.63□□□□□ -1.35
SNX18Q96RF0 PHB2P1-201ENST00000434943 890 ntBASIC6.63□□□□□ -1.35
SNX18Q96RF0 FUNDC2P2-202ENST00000443452 493 ntBASIC6.63□□□□□ -1.35
SNX18Q96RF0 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 RPS29P5-201ENST00000452777 171 ntBASIC6.63□□□□□ -1.35
SNX18Q96RF0 AC007000.1-201ENST00000453064 794 ntBASIC6.63□□□□□ -1.35
SNX18Q96RF0 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 RN7SL414P-201ENST00000469545 294 ntBASIC6.63□□□□□ -1.35
SNX18Q96RF0 AC008799.2-201ENST00000484429 647 ntBASIC6.63□□□□□ -1.35
SNX18Q96RF0 RN7SL647P-201ENST00000485429 300 ntBASIC6.63□□□□□ -1.35
SNX18Q96RF0 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 AC074198.1-201ENST00000506546 1397 ntBASIC6.63□□□□□ -1.35
SNX18Q96RF0 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 IGKV2-29-201ENST00000521304 372 ntBASIC6.63□□□□□ -1.35
SNX18Q96RF0 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SNX18Q96RF0 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 DNM1P31-201ENST00000564149 696 ntBASIC6.63□□□□□ -1.35
SNX18Q96RF0 AC234775.3-201ENST00000564612 656 ntBASIC6.63□□□□□ -1.35
SNX18Q96RF0 AC092133.1-201ENST00000565828 719 ntBASIC6.63□□□□□ -1.35
SNX18Q96RF0 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 AC011458.1-201ENST00000604034 617 ntBASIC6.63□□□□□ -1.35
SNX18Q96RF0 AC092944.2-201ENST00000605443 889 ntBASIC6.63□□□□□ -1.35
SNX18Q96RF0 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SNX18Q96RF0 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SNX18Q96RF0 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SNX18Q96RF0 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SNX18Q96RF0 MIR6731-201ENST00000614863 72 ntBASIC6.63□□□□□ -1.35
SNX18Q96RF0 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SNX18Q96RF0 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 ENSA-215ENST00000638926 360 ntTSL 5 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SNX18Q96RF0 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
SNX18Q96RF0 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SNX18Q96RF0 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
SNX18Q96RF0 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
SNX18Q96RF0 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
SNX18Q96RF0 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SNX18Q96RF0 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SNX18Q96RF0 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SNX18Q96RF0 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SNX18Q96RF0 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SNX18Q96RF0 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 EEF1A1P5-201ENST00000436459 1389 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 MTCO1P22-201ENST00000604619 1360 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SNX18Q96RF0 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SNX18Q96RF0 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SNX18Q96RF0 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SNX18Q96RF0 PPCS-204ENST00000372562 966 ntTSL 2 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 RNU6-1176P-201ENST00000390955 107 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 OR7E91P-201ENST00000400027 866 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 AC091390.2-201ENST00000432573 374 ntBASIC6.62□□□□□ -1.35
SNX18Q96RF0 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
SNX18Q96RF0 MTND4P15-201ENST00000437913 1033 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms