Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC8.34□□□□□ -1.07
SNED1Q8TER0 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SNED1Q8TER0 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC8.34□□□□□ -1.07
SNED1Q8TER0 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SNED1Q8TER0 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SNED1Q8TER0 RPL26P30-201ENST00000453533 435 ntBASIC8.34□□□□□ -1.07
SNED1Q8TER0 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC8.34□□□□□ -1.07
SNED1Q8TER0 RNA5SP441-201ENST00000516809 88 ntBASIC8.34□□□□□ -1.07
SNED1Q8TER0 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC8.34□□□□□ -1.07
SNED1Q8TER0 AC135983.3-201ENST00000528049 1226 ntBASIC8.34□□□□□ -1.07
SNED1Q8TER0 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC8.34□□□□□ -1.07
SNED1Q8TER0 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC8.34□□□□□ -1.07
SNED1Q8TER0 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC8.34□□□□□ -1.07
SNED1Q8TER0 AL845552.1-201ENST00000556820 323 ntBASIC8.34□□□□□ -1.07
SNED1Q8TER0 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SNED1Q8TER0 AC073862.4-201ENST00000622982 854 ntBASIC8.34□□□□□ -1.07
SNED1Q8TER0 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
SNED1Q8TER0 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNED1Q8TER0 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNED1Q8TER0 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SNED1Q8TER0 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNED1Q8TER0 AC023818.2-201ENST00000623817 2304 ntBASIC8.34□□□□□ -1.07
SNED1Q8TER0 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.08
SNED1Q8TER0 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
SNED1Q8TER0 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SNED1Q8TER0 PSMC1P4-201ENST00000515236 1327 ntBASIC8.33□□□□□ -1.08
SNED1Q8TER0 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SNED1Q8TER0 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SNED1Q8TER0 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC8.33□□□□□ -1.08
SNED1Q8TER0 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC8.33□□□□□ -1.08
SNED1Q8TER0 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SNED1Q8TER0 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.33□□□□□ -1.08
SNED1Q8TER0 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC8.33□□□□□ -1.08
SNED1Q8TER0 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
SNED1Q8TER0 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC8.33□□□□□ -1.08
SNED1Q8TER0 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC8.33□□□□□ -1.08
SNED1Q8TER0 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC8.33□□□□□ -1.08
SNED1Q8TER0 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC8.33□□□□□ -1.08
SNED1Q8TER0 AC114755.4-201ENST00000439114 443 ntBASIC8.33□□□□□ -1.08
SNED1Q8TER0 DNAJA1P5-201ENST00000440278 943 ntBASIC8.33□□□□□ -1.08
SNED1Q8TER0 GAPDHP16-201ENST00000448152 962 ntBASIC8.33□□□□□ -1.08
SNED1Q8TER0 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SNED1Q8TER0 GLRXP3-201ENST00000470810 321 ntBASIC8.33□□□□□ -1.08
SNED1Q8TER0 AC026774.2-201ENST00000513990 1098 ntBASIC8.33□□□□□ -1.08
SNED1Q8TER0 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC8.33□□□□□ -1.08
SNED1Q8TER0 AL445383.1-201ENST00000554689 874 ntBASIC8.33□□□□□ -1.08
SNED1Q8TER0 AC079315.1-201ENST00000602952 623 ntBASIC8.33□□□□□ -1.08
SNED1Q8TER0 AC114477.1-201ENST00000605097 605 ntBASIC8.33□□□□□ -1.08
SNED1Q8TER0 AC108865.2-201ENST00000606881 432 ntBASIC8.33□□□□□ -1.08
SNED1Q8TER0 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SNED1Q8TER0 SYNJ1-201ENST00000357345 7059 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
SNED1Q8TER0 SYNJ1-203ENST00000382499 7094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
SNED1Q8TER0 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SNED1Q8TER0 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SNED1Q8TER0 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SNED1Q8TER0 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SNED1Q8TER0 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNED1Q8TER0 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC8.32□□□□□ -1.08
SNED1Q8TER0 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNED1Q8TER0 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNED1Q8TER0 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SNED1Q8TER0 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
SNED1Q8TER0 RN7SKP47-201ENST00000365347 328 ntBASIC8.32□□□□□ -1.08
SNED1Q8TER0 RN7SL552P-201ENST00000462094 276 ntBASIC8.32□□□□□ -1.08
SNED1Q8TER0 CREM-242ENST00000490511 469 ntTSL 2 BASIC8.32□□□□□ -1.08
SNED1Q8TER0 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
SNED1Q8TER0 AC018645.1-201ENST00000505003 109 ntBASIC8.32□□□□□ -1.08
SNED1Q8TER0 AC091849.1-201ENST00000509920 121 ntBASIC8.32□□□□□ -1.08
SNED1Q8TER0 SNX18P23-201ENST00000510867 677 ntBASIC8.32□□□□□ -1.08
SNED1Q8TER0 HMGN1P17-201ENST00000513734 295 ntBASIC8.32□□□□□ -1.08
SNED1Q8TER0 OR52H2P-201ENST00000514607 902 ntBASIC8.32□□□□□ -1.08
SNED1Q8TER0 IGKV1OR22-1-201ENST00000521497 360 ntBASIC8.32□□□□□ -1.08
SNED1Q8TER0 AL133399.1-201ENST00000527476 298 ntBASIC8.32□□□□□ -1.08
SNED1Q8TER0 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC8.32□□□□□ -1.08
SNED1Q8TER0 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC8.32□□□□□ -1.08
SNED1Q8TER0 AC007448.1-201ENST00000582714 234 ntBASIC8.32□□□□□ -1.08
SNED1Q8TER0 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC8.32□□□□□ -1.08
SNED1Q8TER0 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC8.32□□□□□ -1.08
SNED1Q8TER0 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC8.32□□□□□ -1.08
SNED1Q8TER0 AL122023.1-201ENST00000622847 530 ntBASIC8.32□□□□□ -1.08
SNED1Q8TER0 AL109924.4-201ENST00000623089 670 ntBASIC8.32□□□□□ -1.08
SNED1Q8TER0 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SNED1Q8TER0 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC8.32□□□□□ -1.08
SNED1Q8TER0 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNED1Q8TER0 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SNED1Q8TER0 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNED1Q8TER0 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC8.32□□□□□ -1.08
SNED1Q8TER0 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNED1Q8TER0 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNED1Q8TER0 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNED1Q8TER0 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SNED1Q8TER0 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC8.32□□□□□ -1.08
SNED1Q8TER0 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SNED1Q8TER0 AC131392.2-201ENST00000505635 4332 ntBASIC8.32□□□□□ -1.08
SNED1Q8TER0 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SNED1Q8TER0 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SNED1Q8TER0 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
SNED1Q8TER0 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNED1Q8TER0 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNED1Q8TER0 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms