Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 AC126773.4-201ENST00000612545 3043 ntBASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
TRIM48Q8IWZ4 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 LINC00641-202ENST00000555688 1763 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 AC013268.3-201ENST00000262716 2324 ntBASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 AC092570.3-201ENST00000420113 693 ntBASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 AC123904.1-201ENST00000441072 368 ntBASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 Z77249.1-201ENST00000444622 1175 ntBASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 RPL24P8-201ENST00000446071 474 ntBASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 AC013787.1-201ENST00000460165 307 ntBASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 RN7SKP242-201ENST00000515967 289 ntBASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 HNRNPCP8-201ENST00000528764 888 ntBASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 DUXAP5-201ENST00000529668 529 ntBASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 RN7SL697P-201ENST00000582484 299 ntBASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 AC137695.2-201ENST00000603123 754 ntBASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 KATNBL1P5-201ENST00000605015 517 ntBASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 AC243830.2-201ENST00000618067 630 ntBASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 AC004014.2-201ENST00000623718 5122 ntBASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 TET1P1-201ENST00000426627 2301 ntBASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM48Q8IWZ4 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 CREM-214ENST00000395887 849 ntTSL 5 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AC231533.2-201ENST00000419045 978 ntBASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 VN1R35P-201ENST00000428102 693 ntBASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 EEF1A1P27-201ENST00000429983 1135 ntBASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AC005550.1-201ENST00000438923 312 ntTSL 2 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AL353803.3-201ENST00000444641 335 ntBASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 MTND1P33-201ENST00000446251 917 ntBASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 CDC42P2-201ENST00000448566 569 ntBASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AL390026.1-201ENST00000456647 457 ntBASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 OR7E62P-201ENST00000456741 477 ntBASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC7.32□□□□□ -1.24
TRIM48Q8IWZ4 AC104164.3-201ENST00000467363 1258 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms