Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 AC018688.1-201ENST00000636528 1754 ntBASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 MIR187-201ENST00000385062 109 ntBASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 AL354714.5-201ENST00000450131 590 ntBASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 AL136981.1-203ENST00000451452 3844 ntBASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 GLRXP3-201ENST00000470810 321 ntBASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 AC008868.1-201ENST00000509786 737 ntBASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 AC069240.2-201ENST00000550242 609 ntBASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 IGLJCOR18-201ENST00000584002 424 ntBASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 MIR4428-201ENST00000584884 73 ntBASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 AL358913.2-201ENST00000553881 1548 ntBASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
H3F3CQ6NXT2 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.52□□□□□ -1.36
H3F3CQ6NXT2 TMEM75-201ENST00000624314 2165 ntBASIC6.52□□□□□ -1.36
H3F3CQ6NXT2 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 AC009220.2-201ENST00000489759 1751 ntBASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 RNU6-1017P-201ENST00000363613 106 ntBASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 VN1R66P-201ENST00000412929 916 ntBASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 AL354794.2-201ENST00000424795 1248 ntBASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 AL022324.2-201ENST00000434827 780 ntBASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 RN7SL372P-201ENST00000461982 298 ntBASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 IGLC4-201ENST00000517690 248 ntBASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 AC026458.1-201ENST00000564330 438 ntBASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 AC093283.1-201ENST00000565306 1075 ntBASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 AC096708.2-201ENST00000577676 512 ntBASIC6.52□□□□□ -1.37
H3F3CQ6NXT2 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms