Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 METTL5-202ENST00000308099 629 ntTSL 3 BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 RN7SKP107-201ENST00000364157 290 ntBASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 FAM204BP-201ENST00000369171 701 ntBASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 SNX19-202ENST00000426933 888 ntTSL 2 BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 AC066616.1-201ENST00000486795 413 ntBASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 SAA3P-201ENST00000533267 365 ntBASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 WDR45BP1-201ENST00000583470 1029 ntBASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 MIR4428-201ENST00000584884 73 ntBASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 AC005753.1-201ENST00000623837 618 ntBASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 OR2A3P-202ENST00000641249 1776 ntBASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.07
CLIP2Q9UDT6 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 RAD17P2-201ENST00000451754 1977 ntBASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 CREM-216ENST00000429130 1476 ntTSL 5 BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 MIR187-201ENST00000385062 109 ntBASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 E2F6P1-201ENST00000428850 745 ntBASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 IGKV1OR10-1-201ENST00000442306 329 ntBASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 IGKV1OR22-5-201ENST00000458718 354 ntBASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 RN7SL868P-201ENST00000485915 303 ntBASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 AC120036.3-201ENST00000517826 292 ntBASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 AC103968.1-201ENST00000557841 573 ntBASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 RN7SL32P-201ENST00000580514 281 ntBASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 TMEM14EP-202ENST00000639378 1296 ntBASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 AC061975.7-201ENST00000592016 2692 ntBASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 ENO1P4-201ENST00000416471 1785 ntBASIC8.33□□□□□ -1.08
CLIP2Q9UDT6 AL162171.3-201ENST00000617439 3178 ntBASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 PRNCR1-201ENST00000635449 12727 ntBASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 RN7SKP254-201ENST00000410685 310 ntBASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 AC008753.1-201ENST00000423096 284 ntBASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 CHCHD3P1-201ENST00000425516 676 ntBASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 RPL23AP8-201ENST00000479812 475 ntBASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 DCAF13P2-201ENST00000514188 555 ntBASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 AC106782.7-201ENST00000624024 418 ntBASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 AC008626.2-201ENST00000624425 248 ntBASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 AC133555.5-201ENST00000624430 418 ntBASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CLIP2Q9UDT6 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms