Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.1□□□□□ -1.43
SSX3Q99909 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX3Q99909 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.1□□□□□ -1.43
SSX3Q99909 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.1□□□□□ -1.43
SSX3Q99909 LINC00641-202ENST00000555688 1763 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSX3Q99909 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSX3Q99909 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSX3Q99909 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SSX3Q99909 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX3Q99909 AL139384.2-201ENST00000613809 3590 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.09□□□□□ -1.43
SSX3Q99909 DDX50P1-201ENST00000438163 2400 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX3Q99909 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
SSX3Q99909 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6.09□□□□□ -1.43
SSX3Q99909 LINC01747-203ENST00000634603 1377 ntTSL 4 BASIC6.09□□□□□ -1.43
SSX3Q99909 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SSX3Q99909 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSX3Q99909 AC018688.1-201ENST00000636528 1754 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSX3Q99909 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SSX3Q99909 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX3Q99909 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX3Q99909 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSX3Q99909 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.09□□□□□ -1.43
SSX3Q99909 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX3Q99909 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.43
SSX3Q99909 SNORD46-201ENST00000364043 104 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSX3Q99909 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
SSX3Q99909 MIR640-201ENST00000385086 96 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SSX3Q99909 NACAP7-201ENST00000407371 609 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 GAS8-AS1-201ENST00000408886 435 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSX3Q99909 SNX18P13-201ENST00000412442 529 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 AC004986.1-201ENST00000414855 607 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 PPIAP30-201ENST00000415473 519 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.09□□□□□ -1.43
SSX3Q99909 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.09□□□□□ -1.43
SSX3Q99909 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC6.09□□□□□ -1.43
SSX3Q99909 AC008753.1-201ENST00000423096 284 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 CDK7P1-201ENST00000434574 693 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 OR52U1P-201ENST00000439752 923 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC6.09□□□□□ -1.43
SSX3Q99909 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX3Q99909 AL031736.1-201ENST00000449688 618 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC6.09□□□□□ -1.43
SSX3Q99909 RNU7-157P-201ENST00000459600 66 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSX3Q99909 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC6.09□□□□□ -1.43
SSX3Q99909 RN7SL145P-201ENST00000469955 296 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC6.09□□□□□ -1.43
SSX3Q99909 BLNK-209ENST00000495266 440 ntTSL 5 BASIC6.09□□□□□ -1.43
SSX3Q99909 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.09□□□□□ -1.43
SSX3Q99909 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC6.09□□□□□ -1.43
SSX3Q99909 AP004833.1-201ENST00000507987 1238 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC6.09□□□□□ -1.43
SSX3Q99909 AC090539.2-201ENST00000523425 671 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 EIF4EP5-201ENST00000528228 640 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 OR7E96P-201ENST00000530816 976 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC6.09□□□□□ -1.43
SSX3Q99909 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC6.09□□□□□ -1.43
SSX3Q99909 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC6.09□□□□□ -1.43
SSX3Q99909 COX4I1P1-201ENST00000554239 509 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 APEX1-214ENST00000557054 888 ntTSL 5 BASIC6.09□□□□□ -1.43
SSX3Q99909 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC6.09□□□□□ -1.43
SSX3Q99909 PPIAP14-201ENST00000577627 496 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC6.09□□□□□ -1.43
SSX3Q99909 FXYD6P1-201ENST00000604857 285 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSX3Q99909 MIAT_exon1.1-201ENST00000617016 135 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX3Q99909 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC6.09□□□□□ -1.43
SSX3Q99909 HBG1-202ENST00000632727 369 ntTSL 3 BASIC6.09□□□□□ -1.43
SSX3Q99909 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.09□□□□□ -1.43
SSX3Q99909 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC6.09□□□□□ -1.43
SSX3Q99909 CASC19-208ENST00000641056 1292 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 CASC19-227ENST00000641411 1285 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 AC119674.1-209ENST00000642031 997 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC6.09□□□□□ -1.43
SSX3Q99909 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SSX3Q99909 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC6.09□□□□□ -1.43
SSX3Q99909 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SSX3Q99909 AC007159.1-201ENST00000566529 4706 ntBASIC6.09□□□□□ -1.43
SSX3Q99909 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.09□□□□□ -1.43
SSX3Q99909 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SSX3Q99909 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SSX3Q99909 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SSX3Q99909 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC6.09□□□□□ -1.44
SSX3Q99909 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
SSX3Q99909 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SSX3Q99909 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSX3Q99909 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX3Q99909 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSX3Q99909 CASC19-255ENST00000641733 1385 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.08□□□□□ -1.44
SSX3Q99909 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.08□□□□□ -1.44
SSX3Q99909 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms