Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC8.8□□□□□ -1
ERCC3P19447 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC8.8□□□□□ -1
ERCC3P19447 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC8.8□□□□□ -1
ERCC3P19447 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC8.8□□□□□ -1
ERCC3P19447 IGLVIV-59-201ENST00000520218 250 ntBASIC8.8□□□□□ -1
ERCC3P19447 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC8.8□□□□□ -1
ERCC3P19447 AC034205.1-201ENST00000520621 638 ntBASIC8.8□□□□□ -1
ERCC3P19447 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC8.8□□□□□ -1
ERCC3P19447 OR7E96P-201ENST00000530816 976 ntBASIC8.8□□□□□ -1
ERCC3P19447 C1GALT1P1-201ENST00000548895 1089 ntBASIC8.8□□□□□ -1
ERCC3P19447 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC8.8□□□□□ -1
ERCC3P19447 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC8.8□□□□□ -1
ERCC3P19447 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC8.8□□□□□ -1
ERCC3P19447 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC8.8□□□□□ -1
ERCC3P19447 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC8.8□□□□□ -1
ERCC3P19447 AC006116.6-201ENST00000593258 1103 ntBASIC8.8□□□□□ -1
ERCC3P19447 SNORD91A-202ENST00000609620 191 ntBASIC8.8□□□□□ -1
ERCC3P19447 AC006335.3-201ENST00000613408 292 ntBASIC8.8□□□□□ -1
ERCC3P19447 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC8.8□□□□□ -1
ERCC3P19447 AL121985.2-201ENST00000621192 555 ntBASIC8.8□□□□□ -1
ERCC3P19447 ASB8-218ENST00000629941 278 ntTSL 5 BASIC8.8□□□□□ -1
ERCC3P19447 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC8.8□□□□□ -1
ERCC3P19447 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
ERCC3P19447 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
ERCC3P19447 SOCS5P5-201ENST00000402732 1586 ntBASIC8.8□□□□□ -1
ERCC3P19447 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC8.8□□□□□ -1
ERCC3P19447 MAPK10-347ENST00000641762 2856 ntBASIC8.8□□□□□ -1
ERCC3P19447 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
ERCC3P19447 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC8.8□□□□□ -1
ERCC3P19447 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
ERCC3P19447 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
ERCC3P19447 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC8.8□□□□□ -1
ERCC3P19447 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
ERCC3P19447 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC8.8□□□□□ -1
ERCC3P19447 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
ERCC3P19447 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
ERCC3P19447 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC8.8□□□□□ -1
ERCC3P19447 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC8.8□□□□□ -1
ERCC3P19447 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC8.8□□□□□ -1
ERCC3P19447 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
ERCC3P19447 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
ERCC3P19447 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
ERCC3P19447 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC8.79□□□□□ -1
ERCC3P19447 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
ERCC3P19447 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC8.79□□□□□ -1
ERCC3P19447 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
ERCC3P19447 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC8.79□□□□□ -1
ERCC3P19447 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
ERCC3P19447 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
ERCC3P19447 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC8.79□□□□□ -1
ERCC3P19447 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
ERCC3P19447 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC8.79□□□□□ -1
ERCC3P19447 AC023818.2-201ENST00000623817 2304 ntBASIC8.79□□□□□ -1
ERCC3P19447 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC8.79□□□□□ -1
ERCC3P19447 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
ERCC3P19447 RNU1-38P-201ENST00000362817 144 ntBASIC8.79□□□□□ -1
ERCC3P19447 MIR138-2-201ENST00000384916 84 ntBASIC8.79□□□□□ -1
ERCC3P19447 COX6A1P3-201ENST00000404167 293 ntBASIC8.79□□□□□ -1
ERCC3P19447 NIFKP3-201ENST00000417799 865 ntBASIC8.79□□□□□ -1
ERCC3P19447 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC8.79□□□□□ -1
ERCC3P19447 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
ERCC3P19447 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC8.79□□□□□ -1
ERCC3P19447 AL353754.1-201ENST00000440219 340 ntBASIC8.79□□□□□ -1
ERCC3P19447 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC8.79□□□□□ -1
ERCC3P19447 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC8.79□□□□□ -1
ERCC3P19447 CHIAP1-201ENST00000456220 995 ntBASIC8.79□□□□□ -1
ERCC3P19447 NDUFS5P2-201ENST00000484004 306 ntBASIC8.79□□□□□ -1
ERCC3P19447 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
ERCC3P19447 AC104123.1-203ENST00000513158 575 ntTSL 3 BASIC8.79□□□□□ -1
ERCC3P19447 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC8.79□□□□□ -1
ERCC3P19447 AC021451.1-201ENST00000523498 1129 ntBASIC8.79□□□□□ -1
ERCC3P19447 SSU72P6-201ENST00000532644 488 ntBASIC8.79□□□□□ -1
ERCC3P19447 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC8.79□□□□□ -1
ERCC3P19447 UBE2CP4-201ENST00000561405 535 ntBASIC8.79□□□□□ -1
ERCC3P19447 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC8.79□□□□□ -1
ERCC3P19447 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC8.79□□□□□ -1
ERCC3P19447 AC023762.1-201ENST00000603280 584 ntBASIC8.79□□□□□ -1
ERCC3P19447 AL133370.2-201ENST00000619934 439 ntBASIC8.79□□□□□ -1
ERCC3P19447 CTXN3-204ENST00000620385 1208 ntAPPRIS P1 BASIC8.79□□□□□ -1
ERCC3P19447 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
ERCC3P19447 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC8.79□□□□□ -1
ERCC3P19447 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
ERCC3P19447 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC8.79□□□□□ -1
ERCC3P19447 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
ERCC3P19447 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC8.79□□□□□ -1
ERCC3P19447 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
ERCC3P19447 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
ERCC3P19447 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC8.79□□□□□ -1
ERCC3P19447 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
ERCC3P19447 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
ERCC3P19447 MFSD8-227ENST00000641393 4069 ntBASIC8.79□□□□□ -1
ERCC3P19447 SUN3-202ENST00000395572 1348 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
ERCC3P19447 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC8.78□□□□□ -1
ERCC3P19447 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC8.78□□□□□ -1
ERCC3P19447 AC067942.1-201ENST00000488045 1493 ntBASIC8.78□□□□□ -1
ERCC3P19447 CR382285.2-201ENST00000624662 1495 ntBASIC8.78□□□□□ -1
ERCC3P19447 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
ERCC3P19447 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC8.78□□□□□ -1
ERCC3P19447 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
ERCC3P19447 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC8.78□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms