Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MAPK10-248ENST00000640490 2715 ntTSL 5 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 AC092646.2-201ENST00000431242 2095 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 SLFN12-206ENST00000452764 2423 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 SLC16A12-201ENST00000371790 4617 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 UGT2B7-205ENST00000622664 1532 ntTSL 5 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 DNAH10-209ENST00000614082 3484 ntTSL 5 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 IL26-201ENST00000229134 1075 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 MTHFD2P5-201ENST00000320415 844 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 RNU6-181P-201ENST00000363225 107 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 MORN5-201ENST00000373764 705 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 CRYGS-202ENST00000392499 1132 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 BTF3P7-201ENST00000407097 488 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 RN7SKP152-201ENST00000410444 315 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 AL136380.2-201ENST00000411837 492 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 NONOP2-201ENST00000414613 1231 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 RPL7P53-201ENST00000421245 739 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 WRBP1-201ENST00000423352 334 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 RPS23P8-201ENST00000429775 330 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 RPS26P4-201ENST00000431743 355 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 AL354761.1-201ENST00000434190 526 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 OR51R1P-201ENST00000435309 952 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 YWHAZP7-201ENST00000436906 631 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 SDHDP2-201ENST00000436937 465 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 NECAP1P2-201ENST00000455668 727 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 RN7SL448P-201ENST00000475566 295 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 AC093010.2-201ENST00000481773 743 ntTSL 3 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 AK4P6-201ENST00000505168 528 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 AC138409.2-202ENST00000507274 458 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 MTATP6P22-201ENST00000507369 598 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 AC109588.1-202ENST00000515720 880 ntTSL 3 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 AP000757.1-202ENST00000525260 891 ntTSL 3 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 AC135983.3-201ENST00000528049 1226 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 SETP17-201ENST00000534163 817 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 AP001025.3-201ENST00000578787 864 ntTSL 3 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 AC006120.1-201ENST00000579375 546 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 AC233702.11-201ENST00000598588 333 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 PROX1-AS1-208ENST00000601335 691 ntTSL 5 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 AL020997.3-201ENST00000602843 359 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 AC009237.13-201ENST00000603193 276 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 OR2BH1P-201ENST00000608850 864 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 Z99129.1-201ENST00000612510 255 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 AC116165.3-201ENST00000614524 400 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 LINC01808-202ENST00000641680 1116 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 OR8A1-204ENST00000642111 1145 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 ITPRIPL1-201ENST00000361124 4295 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 MTCO1P6-201ENST00000481192 1384 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 ACTBP13-201ENST00000423971 3959 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 GIN1-201ENST00000399004 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 FBXO38-203ENST00000394370 4132 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 AP005230.1-205ENST00000639316 2015 ntTSL 5 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 BCO2-201ENST00000357685 2930 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 ZNF197-205ENST00000396058 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AL354685.2-201ENST00000448218 1447 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 LGALS8-202ENST00000323938 1855 ntTSL 5 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AC092329.4-202ENST00000638174 1989 ntTSL 2 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AP005139.1-201ENST00000580702 1647 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 GSTM2-204ENST00000369831 1730 ntTSL 2 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 RNU6-692P-201ENST00000384496 107 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 MIR185-201ENST00000385288 82 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 ATP5F1P4-201ENST00000397288 746 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 LINC02449-202ENST00000399866 517 ntTSL 3 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 RSL24D1P4-201ENST00000400938 484 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AL590084.1-201ENST00000407885 387 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms