Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 MT1B-202ENST00000562399 351 ntTSL 3 BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 Z93930.3-201ENST00000607919 749 ntBASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 AL590396.3-201ENST00000636334 300 ntBASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 AL117339.4-201ENST00000608335 7063 ntBASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
CHMP4CQ96CF2 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 KYNUP2-201ENST00000582280 1329 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 RNU4-81P-201ENST00000363561 144 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 RNA5SP429-201ENST00000363688 109 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AC090114.1-201ENST00000393266 448 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 SUMO2P13-201ENST00000403109 272 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AL117344.1-201ENST00000407196 616 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AL593856.1-201ENST00000419949 805 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AL390840.1-201ENST00000420303 988 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 CYP4F34P-201ENST00000425951 481 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AC093799.1-201ENST00000452411 499 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 SCDP1-201ENST00000455244 1081 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AC018892.2-201ENST00000457656 693 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 RPS4XP19-201ENST00000460237 736 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AC117395.2-201ENST00000463122 1128 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AC134698.1-201ENST00000511619 643 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AC120036.3-201ENST00000517826 292 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AL365223.1-201ENST00000574864 1297 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AC061975.3-201ENST00000583209 244 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AC015849.6-201ENST00000605454 474 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AC080112.3-201ENST00000612552 880 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AC022960.2-201ENST00000616300 666 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 AC093909.6-201ENST00000624757 775 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 DYNC1I2P1-201ENST00000435916 1838 ntBASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CHMP4CQ96CF2 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
CHMP4CQ96CF2 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
CHMP4CQ96CF2 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 IARS-205ENST00000443024 4341 ntTSL 5 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 MYO5BP3-201ENST00000431872 1279 ntBASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 MORF4L1P5-201ENST00000433352 961 ntBASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 UBE2V2P1-201ENST00000434717 398 ntBASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 AC027124.1-201ENST00000440852 466 ntBASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms