Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
RHBDL3P58872 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RHBDL3P58872 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
RHBDL3P58872 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RHBDL3P58872 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.36□□□□□ -1.07
RHBDL3P58872 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RHBDL3P58872 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
RHBDL3P58872 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC8.36□□□□□ -1.07
RHBDL3P58872 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
RHBDL3P58872 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC8.35□□□□□ -1.07
RHBDL3P58872 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC8.35□□□□□ -1.07
RHBDL3P58872 NPL-212ENST00000614468 2376 ntTSL 5 BASIC8.35□□□□□ -1.07
RHBDL3P58872 AL121949.2-201ENST00000403446 1548 ntBASIC8.35□□□□□ -1.07
RHBDL3P58872 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RHBDL3P58872 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
RHBDL3P58872 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RHBDL3P58872 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
RHBDL3P58872 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RHBDL3P58872 AC067942.1-201ENST00000488045 1493 ntBASIC8.35□□□□□ -1.07
RHBDL3P58872 OR10D1P-201ENST00000355343 936 ntBASIC8.35□□□□□ -1.07
RHBDL3P58872 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RHBDL3P58872 RNA5SP382-201ENST00000363355 112 ntBASIC8.35□□□□□ -1.07
RHBDL3P58872 PRELID1P2-201ENST00000407805 396 ntBASIC8.35□□□□□ -1.07
RHBDL3P58872 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC8.35□□□□□ -1.07
RHBDL3P58872 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC8.35□□□□□ -1.07
RHBDL3P58872 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC8.35□□□□□ -1.07
RHBDL3P58872 TPTE2P1-204ENST00000435256 593 ntBASIC8.35□□□□□ -1.07
RHBDL3P58872 SDHCP3-201ENST00000445371 506 ntBASIC8.35□□□□□ -1.07
RHBDL3P58872 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC8.35□□□□□ -1.07
RHBDL3P58872 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC8.35□□□□□ -1.07
RHBDL3P58872 RN7SL83P-201ENST00000468131 297 ntBASIC8.35□□□□□ -1.07
RHBDL3P58872 AP003385.3-201ENST00000472498 287 ntBASIC8.35□□□□□ -1.07
RHBDL3P58872 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC8.35□□□□□ -1.07
RHBDL3P58872 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC8.35□□□□□ -1.07
RHBDL3P58872 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC8.35□□□□□ -1.07
RHBDL3P58872 MINOS1P4-201ENST00000515470 318 ntBASIC8.35□□□□□ -1.07
RHBDL3P58872 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC8.35□□□□□ -1.07
RHBDL3P58872 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC8.35□□□□□ -1.07
RHBDL3P58872 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RHBDL3P58872 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC8.35□□□□□ -1.07
RHBDL3P58872 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC8.35□□□□□ -1.07
RHBDL3P58872 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC8.35□□□□□ -1.07
RHBDL3P58872 MRPL57P3-201ENST00000619218 176 ntBASIC8.35□□□□□ -1.07
RHBDL3P58872 AC004943.1-203ENST00000624370 1074 ntBASIC8.35□□□□□ -1.07
RHBDL3P58872 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC8.35□□□□□ -1.07
RHBDL3P58872 RFC1-217ENST00000639695 867 ntTSL 5 BASIC8.35□□□□□ -1.07
RHBDL3P58872 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RHBDL3P58872 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RHBDL3P58872 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
RHBDL3P58872 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RHBDL3P58872 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RHBDL3P58872 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RHBDL3P58872 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RHBDL3P58872 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC8.35□□□□□ -1.07
RHBDL3P58872 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
RHBDL3P58872 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RHBDL3P58872 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
RHBDL3P58872 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RHBDL3P58872 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
RHBDL3P58872 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
RHBDL3P58872 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC8.34□□□□□ -1.07
RHBDL3P58872 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.34□□□□□ -1.07
RHBDL3P58872 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC8.34□□□□□ -1.07
RHBDL3P58872 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RHBDL3P58872 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC8.34□□□□□ -1.07
RHBDL3P58872 RNU6-1017P-201ENST00000363613 106 ntBASIC8.34□□□□□ -1.07
RHBDL3P58872 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RHBDL3P58872 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RHBDL3P58872 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
RHBDL3P58872 KRTAP3-4P-201ENST00000430780 280 ntBASIC8.34□□□□□ -1.07
RHBDL3P58872 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RHBDL3P58872 NPM1P48-201ENST00000436002 853 ntBASIC8.34□□□□□ -1.07
RHBDL3P58872 PRDX1P1-201ENST00000449329 596 ntBASIC8.34□□□□□ -1.07
RHBDL3P58872 KF459542.1-201ENST00000450908 553 ntBASIC8.34□□□□□ -1.07
RHBDL3P58872 GLRXP3-201ENST00000470810 321 ntBASIC8.34□□□□□ -1.07
RHBDL3P58872 RPS7P11-201ENST00000484240 586 ntBASIC8.34□□□□□ -1.07
RHBDL3P58872 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC8.34□□□□□ -1.07
RHBDL3P58872 AC093878.1-201ENST00000515630 432 ntBASIC8.34□□□□□ -1.07
RHBDL3P58872 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC8.34□□□□□ -1.07
RHBDL3P58872 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RHBDL3P58872 ACER3-213ENST00000533873 929 ntTSL 2 BASIC8.34□□□□□ -1.07
RHBDL3P58872 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC8.34□□□□□ -1.07
RHBDL3P58872 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC8.34□□□□□ -1.07
RHBDL3P58872 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC8.34□□□□□ -1.07
RHBDL3P58872 OR4C49P-201ENST00000563891 900 ntBASIC8.34□□□□□ -1.07
RHBDL3P58872 AC090286.3-201ENST00000573133 187 ntBASIC8.34□□□□□ -1.07
RHBDL3P58872 MIR378C-201ENST00000578683 81 ntBASIC8.34□□□□□ -1.07
RHBDL3P58872 AC024267.2-201ENST00000582737 417 ntBASIC8.34□□□□□ -1.07
RHBDL3P58872 AC079414.3-201ENST00000612986 1090 ntBASIC8.34□□□□□ -1.07
RHBDL3P58872 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RHBDL3P58872 AC017037.4-201ENST00000624526 826 ntBASIC8.34□□□□□ -1.07
RHBDL3P58872 AL049541.2-201ENST00000626377 555 ntBASIC8.34□□□□□ -1.07
RHBDL3P58872 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
RHBDL3P58872 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
RHBDL3P58872 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
RHBDL3P58872 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RHBDL3P58872 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RHBDL3P58872 AC078880.4-201ENST00000617627 1749 ntBASIC8.34□□□□□ -1.07
RHBDL3P58872 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RHBDL3P58872 MRPS17P1-201ENST00000596009 3130 ntBASIC8.34□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms